Pyramidobacter piscolens: CE91St28_08030
Help
Entry
CE91St28_08030 CDS
T08073
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppio
Pyramidobacter piscolens
Brite
KEGG Orthology (KO) [BR:
ppio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppio03400
]
CE91St28_08030 (sbcD)
DNA repair and recombination proteins [BR:
ppio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CE91St28_08030 (sbcD)
Archaeal homologous recombinant proteins
CE91St28_08030 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BDF78009
LinkDB
All DBs
Position
867367..868572
Genome browser
AA seq
401 aa
AA seq
DB search
MRILHTSDWHLGRKLCGQERAGEFRQFLDWLTDTLIDERVDALVVAGDVFDSSTPPLWAQ
SLYYRFLTGLSRTPCRSAVIVAGNHDSAALLDSPRELLGRLGVHVVGAPAEPGAEIFELP
DAQGKAGALCCAVPFLRSRDLCGAMSGEDADAIARAELDGFAKHYADVCALAETRRAGRD
IPIVALGHCFAAGGTVHGDDGVRDLAVGSLGAVPLSAFPENVDYLALGHLHAPQTCGGRE
SRRYCGAPLCMGFGEAGQKKQVCVVDFDGRAASVRALGVPAWQEICRLKGSFDEIAAALS
ELERSGRSVWVEADCDDEGAQGLNDRIRELSGGAVKILRVKVAGAGLADAFSGAGDLNED
WSPREVFRLYLSEHQIEGEEAESLTGAYLEALEAVRTEAAR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagaattcttcacacgtcggactggcatcttggacgcaagctctgcgggcaggagcgg
gccggcgaattccgtcagtttctcgactggttgacggatacgctgattgacgaacgtgtc
gacgcgctcgtggtggcgggggacgttttcgattcctccacgccgcccttgtgggcgcag
agtctttattaccgttttctcaccggattgtcgcgcacgccctgccgcagtgcggtaatc
gtggccggcaatcacgactcggcggcgctgctcgactcgccccgggaactgctggggcgt
ctgggcgtccacgtcgtgggcgcgccggcggaacccggcgcagagattttcgagctgccg
gacgcgcagggaaaggcgggcgcgctgtgctgcgccgtgccgtttctgcgctcgcgcgac
ctctgcggcgccatgtcgggcgaagacgccgacgcgatcgcgcgcgccgaactggacggc
ttcgcgaaacattacgccgatgtgtgcgcgctggccgaaacgcgacgcgcggggcgcgac
atccccatcgtcgccctcggccattgctttgccgccggcggaaccgtgcacggcgatgac
ggcgtgcgcgacctcgcggtcggttcgctgggcgcggtgccgctgtcggcctttcccgag
aacgtcgattatctggcgctcgggcacctgcacgcgccgcagacctgcggcgggcgtgag
agccgccgttattgcggcgcgccgctgtgcatgggcttcggcgaggcggggcagaaaaag
caagtctgcgtcgtcgatttcgacggacgcgccgcttcggttcgcgcgctcggcgtgccc
gcatggcaggagatttgccgcctgaaagggtctttcgacgagatcgccgccgctttgagc
gaactcgaacggtccggccgctccgtctgggtcgaggcggactgcgacgacgagggcgcg
cagggattgaacgaccgcatccgcgagctgagcggcggcgcggtgaagatcctgcgcgtc
aaagtggcgggcgcggggctggcggacgctttttccggcgcgggcgatctgaacgaagac
tggtcgccgcgtgaagttttcaggttgtacctgagcgagcaccaaatcgagggcgaagag
gcggagtccttgacgggcgcgtacctcgaggccctcgaagccgtgcggacggaggcggcg
cgatga
DBGET
integrated database retrieval system
