Pyramidobacter piscolens: CE91St28_11280
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Entry
CE91St28_11280 CDS
T08073
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ppio
Pyramidobacter piscolens
Pathway
ppio02024
Quorum sensing
ppio03060
Protein export
ppio03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CE91St28_11280 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CE91St28_11280 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CE91St28_11280 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppio02044
]
CE91St28_11280 (ffh)
Enzymes [BR:
ppio01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CE91St28_11280 (ffh)
Secretion system [BR:
ppio02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CE91St28_11280 (ffh)
Eukaryotic Sec-SRP protein
CE91St28_11280 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_33
Zeta_toxin
ArsA_ATPase
AAA_16
6PF2K
YqeC
AAA_17
KTI12
Motif
Other DBs
NCBI-ProteinID:
BDF78334
LinkDB
All DBs
Position
complement(1219761..1221110)
Genome browser
AA seq
449 aa
AA seq
DB search
MFDALKERLERIFSGLRGRGKLTEEDVQQALREVRRALLEADVNYKVVKDLVEKIRVRAV
GADVLGSIMPAQQVSAVVYEEIARIMGEGSRGIDISPQPPTLVMMVGLQGGGKTTSSAKL
AKKLSKSHKPMLVACDLRRPAAVDQLRVLAGQAGVAFFGPEAGESDVVALSQRALAYAAS
HLIDVLIFDTAGRLAVDEEMMAELDRMKAALAPHEILLVVDAMSGQEALNVAEAFNNRLG
VTGVVLSKLDGDARGGAALAVLAATGVPVKFAGVGEGLDAIEQFDPRRMAERIMGMGDMA
GLVEKIKEAATETDIQQMAQSFKKQRFTMDNLLAQFAQVEKMGPLDKVMEMLPGAVTSKM
KDLPPEALDDKRLLRMKAIIQSMTKAERRDPAIIKGSRRRRIAEGSGTTVQMVNQLLKQF
EQMSELWKRFGKMGKKRGLLGGLGGMFRR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgcgctcaaagaacgactggaacgcattttcagcggcctgcgcggccgcggc
aagctgacggaagaagacgttcagcaggccctgcgcgaagttcgccgcgcccttctcgaa
gccgacgtcaactacaaagtcgttaaggacctggtcgaaaagatccgcgtccgcgccgtc
ggcgccgacgtgctcggttccatcatgcccgcccagcaagtctccgccgtcgtctacgaa
gaaatcgcccgcatcatgggcgaaggcagccgcggcatcgacatctcgccccagccgccg
acgctggtgatgatggtcggcctgcagggcggcggcaaaacgacgagcagcgccaagctc
gccaaaaagctgagcaagagccacaagcccatgctcgtcgcctgcgacctgcgccgcccc
gccgcagtggatcagctgcgcgtgctggccggccaggccggcgtcgccttcttcggcccc
gaagccggcgaaagcgacgtcgtcgcgctgtcacagcgcgccctcgcctacgccgcttcg
catctgatcgacgtgctcatcttcgacacggccggacgcctcgccgtcgacgaagagatg
atggccgaactcgaccgcatgaaggcggcgctcgctccgcacgagatcctgctggtcgtc
gacgccatgtcgggacaggaagccctgaacgtggccgaagcgttcaacaaccgcctcggc
gtcactggcgtcgtgctcagcaagctcgacggcgacgcccgcggcggagcggccttggcc
gtgctggccgccaccggcgtgccggtcaagttcgccggcgtcggcgaagggctcgacgcc
atcgagcagttcgatccccgccgcatggccgagcgcatcatgggcatgggcgacatggcc
ggtctggtggaaaagatcaaggaagccgcgaccgaaaccgacatccagcagatggcgcag
agcttcaaaaagcagcgcttcacgatggacaacctgctcgcgcagttcgcccaggtcgaa
aagatgggcccgctcgacaaggtgatggagatgctgcccggcgcggtcaccagcaagatg
aaggacttgccgccggaagcgctcgacgacaagcgcctgctgcgcatgaaagccatcatc
cagtcgatgacgaaggccgagcgccgcgatcccgcgatcatcaagggcagccgccggcgc
cgcatcgccgaaggatcgggcaccacggtgcagatggtcaaccagctgctgaagcagttc
gagcagatgagcgagctgtggaagcgtttcggcaagatgggcaaaaaaagaggcctcctt
ggaggcctgggcggcatgttccgccgctga
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