KEGG   Pyramidobacter piscolens: CE91St28_19380
Entry
CE91St28_19380    CDS       T08073                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ppio  Pyramidobacter piscolens
Pathway
ppio03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppio00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CE91St28_19380 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppio03019]
    CE91St28_19380 (rny)
Messenger RNA biogenesis [BR:ppio03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CE91St28_19380 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD HDOD KH_1 KH_PNO1_2nd KH_KhpA-B KH_2 Tox-ODYAM1 HSBP1 RIP_P131-like FapA
Other DBs
NCBI-ProteinID: BDF79144
LinkDB
Position
complement(2063645..2065183)
AA seq 512 aa
MSMYLVLGVFLGIIGGTGAGMFIAKGVAARKVAEARSQAEDIVKEARSSAERDSKLLVSE
ARDEASKVRLEAERDAKERRVELQRTERLLEQKEEKLDRKLEKLQHREDEMKTRQDDLEK
KIQEADELCKRRVTDLEQIAQMTSDQARAQLLHEVEDSAQHAIGLRLAEMEAQAQRDANK
KAREIIVTAVQRCAVEKSSDVAVSTVSLPNDEMKGRIIGREGRNIRAFETATGVDLIVDD
TPEAVTLSCFDPVRREIARLSLEKLVVDGRIHPARIEELVAKATAEVEESIADAGDQTLM
ELGIKQMNPELVRTIGQLRYRYSYGQNALQHSMEVAYISGMIASELGVNEELARRAGLLH
DIGKAVDFKIEGPHALIGADLAKRYGEPPEVINAIGSHHEDMEVKSIYDVIVATADAISA
ARPGARRESIDAYVKRLEKLETVANGFKGVSKAFAIQAGREVRVLVAPSVPDEASVAKLA
YDIARKIEEELKYPGQIKVTAIKEIRASDLAK
NT seq 1539 nt   +upstreamnt  +downstreamnt
ttgagtatgtatctggtacttggagtgttcctcggcatcatcgggggcacgggagcgggg
atgttcatcgccaagggcgtagccgcgcgcaaggtggcggaagcgcgctctcaggcggag
gacatcgtcaaggaagcgcggtccagcgctgagcgcgacagcaagctgctggtctcggag
gcgcgcgacgaagcttccaaagtccgtctcgaagccgaacgcgacgcgaaggagcgccgc
gtggaactgcagcgcaccgaacgccttctggaacagaaagaagagaaactcgaccgcaag
ctggaaaaactccagcaccgcgaggacgagatgaagacccgtcaggacgatctggaaaag
aagatccaggaagccgacgagctctgcaagagacgcgtcaccgatctcgaacagatcgcc
cagatgaccagcgaccaggcccgcgcgcagctgcttcacgaagtcgaagacagcgctcag
cacgcgatcggcctgcggctggcggaaatggaagcgcaggcccagcgcgacgcgaacaag
aaagcccgcgagatcatcgtcaccgccgtgcagcgctgcgccgtggaaaaatcctcggac
gtcgccgtcagcaccgtgtccttgccgaacgacgagatgaaagggcgcatcatcggacgc
gaagggcgcaacatccgcgccttcgagacggccaccggcgtcgacctgatcgtcgacgat
acgccggaagcggtgacgctgagctgcttcgaccccgtgcgccgcgagatcgcccgtctg
tcgctcgaaaaactggtcgtcgacggccgcatccatcccgcccgcatcgaagaactagtc
gccaaggcgaccgccgaagtggaggagtccatcgccgacgccggcgatcagacgctgatg
gaactcggcatcaaacagatgaatcccgagctggtccgcaccatcggccagctgcgctat
cgttacagttatgggcagaacgcccttcagcacagcatggaagtggcgtacatctccggc
atgatcgcctccgaactgggcgtcaacgaagagctggcccgccgtgccgggctgctccat
gacatcggcaaggctgtcgacttcaagatcgaagggccgcacgccctgatcggcgccgac
ctcgccaagcgctacggcgaaccgcccgaagtcatcaacgccatcggctcgcaccacgaa
gacatggaagtcaagagcatttacgacgtcatcgtcgccaccgccgatgccatcagcgcg
gcccgccccggcgcccgccgcgagagcatcgacgcctacgtcaaacgccttgaaaagctc
gaaaccgtggccaacggcttcaagggcgtcagcaaggccttcgccatccaggccggacgc
gaagtccgcgtgctggtcgcgcccagcgttcccgacgaggcttccgtggccaagctggcc
tacgacatcgcccgcaagatcgaagaggaactgaagtatcccggccagatcaaggtcacc
gccatcaaggagatccgcgcctccgacctcgccaagtag

DBGET integrated database retrieval system