Pseudoalteromonas piscicida: B1L02_00055
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Entry
B1L02_00055 CDS
T04942
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppis01011
]
B1L02_00055
Enzymes [BR:
ppis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
B1L02_00055
Peptidoglycan biosynthesis and degradation proteins [BR:
ppis01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
B1L02_00055
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ASD65599
UniProt:
A0AAD0W330
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Position
1:13861..15750
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AA seq
629 aa
AA seq
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MTYWLRRLAVGSLCMVSWLSAAGSTHDEFKEAERIAWSGNYSNFKAAIAQLDHPLKPYVE
MAFYKRHPRLKYQQEIQHFLMVYEHTPLEWPVRAAWLDYLKRYKKKARFIEDYRDTSDVE
LKCTYLAYQLDLGAPTKAILDQVTDIWTVGKSQPKACDSLFRQWQKAGYRTPERVWQRIS
SAAQSGQTSLLDYLEKLLPKNEAYLAELYKKVRQDPSAAAGLYRFSKRTEKEAEIAVYGV
RRLVWRDPDLALRAWQKMQDMFTFTQQQKDSVAYRFALALASKGHEDARFWLNKVPKSLQ
DKKLLQWLMSNMLKEQDWEGISALFVGHDQLSNGQQYWLAYSLAKRGELAKANEIWQQLA
QERDYYGFLAAARLGLPVSLNEAPLNVESSIVERVSHAPGFKRAKALYELERYTQARREW
NYLTNTSSKEEKLAASILAAEFDWYDSTIFTLAQIKAWDYVDLRFPMAFKDLFTKYSERS
RVDVAWSIAIARRESSFAPDARSSADAHGLMQLLPSTAKYVNNRKRVTKNRLYHPATNIR
LGTSYLEYLKRKNAGNEILATASYNAGYHRIKRWLPSEAMPAELWIELIPYRETRDYVKN
VMAYRQVYHTRLGRDGNILASILDMKIVK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacatattggttacgccgcttagctgtaggcagcttatgtatggtgagctggctcagt
gcagccggcagcactcacgacgagtttaaggaggccgagcgcattgcttggtctggtaat
tacagcaactttaaagccgctattgcgcagctcgatcacccgctcaaaccttacgttgaa
atggcgttttacaagcgtcacccaaggctaaagtatcagcaagaaatccagcacttcctc
atggtgtatgaacatacgccgctcgaatggccggtgcgtgctgcttggttagactactta
aagcggtacaagaaaaaagcacgtttcattgaagactaccgtgataccagtgatgttgag
ctcaagtgtacttacttggcctaccaattggacttaggcgcgccaacaaaagccattctt
gaccaagtaaccgatatttggacggtgggaaagtctcagcccaaagcctgcgatagtctt
tttaggcaatggcaaaaagcggggtataggacgcctgagcgtgtctggcagcgaatttct
agtgccgcacaatccggtcaaacgtcactgctagactatcttgagaagctgttaccaaaa
aatgaggcctatctcgccgagctttataaaaaagttcgtcaagatccgagtgccgctgcc
ggactctatcgctttagtaaacgcactgagaaagaagccgaaattgcggtatatggtgta
agacgcttagtttggcgcgatcctgatttagcgttgcgtgcatggcagaagatgcaggat
atgtttactttcacccagcagcaaaaggatagtgttgcttatcgttttgctctggcgctt
gcgtctaaaggccatgaagacgcacggttttggcttaataaagtgcctaaatcgttgcag
gacaaaaagctactacagtggctgatgagtaacatgctgaaagagcaagattgggaaggg
atctcggccttattcgtgggtcacgatcagcttagcaatggtcagcaatactggcttgca
tatagcctcgctaagcgtggtgagttggctaaggctaacgagatttggcagcagttagca
caagagcgtgattactacggctttttggctgctgcacgattggggttaccggtatcactg
aatgaagcgccgttaaatgttgaatctagtatcgtagaacgagtatctcatgcgcctggg
tttaagcgagcaaaggctttatacgaattggaaaggtatactcaagcacgtcgagagtgg
aactatcttactaacacctcaagcaaagaggaaaagcttgcagcatccatattggctgct
gagtttgattggtatgacagcactatttttaccctggcacagatcaaagcgtgggattac
gttgatttgcgtttccccatggcgtttaaagatctgttcactaaatatagtgagcgtagt
cgagtcgatgtcgcatggagcattgcgattgcccgccgggaaagctctttcgcaccagat
gcgcgttcgagtgcggatgcccacggtttaatgcagctgcttccaagcactgctaaatat
gttaataaccgcaagcgcgtaacaaagaatcgcctgtatcatccggccacaaacattcgt
ttggggaccagttatttagagtatttgaagcgtaaaaatgctggtaatgagatattggct
acggcttcgtacaatgcgggctatcatagaattaagcgctggctcccttcagaggccatg
cctgctgaactttggattgagctaatcccataccgagaaacgcgcgactatgtaaaaaat
gtgatggcatatcgacaggtttaccatacccgtctaggtcgtgacggcaacatattggca
agtattttggatatgaaaattgtgaaataa
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