Pseudoalteromonas piscicida: B1L02_00365
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Entry
B1L02_00365 CDS
T04942
Name
(GenBank) 23S rRNA pseudouridine synthase F
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppis03009
]
B1L02_00365
Enzymes [BR:
ppis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
B1L02_00365
Ribosome biogenesis [BR:
ppis03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
B1L02_00365
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASD65652
UniProt:
A0AAD0W2C4
LinkDB
All DBs
Position
1:complement(72893..73585)
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AA seq
230 aa
AA seq
DB search
MSYPMRLAKYLSHCGVCSRRQASRLIDTARVTVNGRLANHIDHINLTDCIMVDGESVAPP
QARRLFVYHKPVGIDCKVNPDDPASIYHVLPKSCRVYPIGRLDKDSRGLLLLTNDGALCQ
QLIHPDHHQEKEYEVQVDKPLDPDFCLKMAAGVPVKGQITLPCTVEQIAHDRFRIVLRQG
LNRQIRRMAHYCGYRVIDLFRVRIANLALTQLKVDSAEVKEISAELIQLT
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatccgatgcgtttggctaaatatctcagccactgcggtgtttgctctaggcga
caagcgtctcgcttaattgatactgcaagagtgaccgtaaatggtcgtttggccaaccac
atagatcacatcaatttgaccgattgcattatggtcgatggtgaatcggtcgcaccgccg
caagcgagaagactctttgtttaccataaacctgttggtatagactgcaaagtgaacccc
gatgatccagcaagtatctaccatgtactaccaaaatcgtgtcgtgtgtatccgataggt
cggctagacaaagacagtcgaggcttactactactcaccaatgatggagcactgtgtcag
cagttaatccacccagaccatcatcaagagaaagaatatgaggtgcaagtcgataagcct
ctggacccagatttttgccttaaaatggcagccggcgtgcccgtaaagggccaaataacc
ctcccctgtaccgttgaacaaatcgcacatgaccgctttagaatagtgttacgacaagga
ctcaatcgccaaataagaagaatggcacactactgtggttatcgggttatcgacttattc
cgagtgcgcatagcaaacttggcattgacacagctaaaggttgactctgccgaagtaaaa
gagatttcagcagagttaattcagttgacctga
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