Pseudoalteromonas piscicida: B1L02_01360
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Entry
B1L02_01360 CDS
T04942
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppis
Pseudoalteromonas piscicida
Pathway
ppis03030
DNA replication
ppis03410
Base excision repair
ppis03420
Nucleotide excision repair
ppis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1L02_01360
03410 Base excision repair
B1L02_01360
03420 Nucleotide excision repair
B1L02_01360
03440 Homologous recombination
B1L02_01360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppis03032
]
B1L02_01360
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_01360
Enzymes [BR:
ppis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1L02_01360
DNA replication proteins [BR:
ppis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B1L02_01360
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B1L02_01360
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1L02_01360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HrpB7
Motif
Other DBs
NCBI-ProteinID:
ASD65825
UniProt:
A0AAD0W2W5
LinkDB
All DBs
Position
1:291707..294463
Genome browser
AA seq
918 aa
AA seq
DB search
MSQIPQNPLILVDGSSYLFRAYHAPPHLTNSKGEATGAIYGVINMLKSLLKQYQPSHMVV
VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIEPIHEIIKAMGLPLVSISGVEADDVIGT
FSKIASEQSRHVLISTGDKDMAQLVNEHVTLINTMTNTILDPEGVVDKFGIGPDLIIDYL
ALMGDKVDNIPGVPGVGEKTALAMLQGLGSIDSLYENLDKIADLGFRGSKTMAKKLEEHQ
AQLKLSYELATIKLDCEVEQDLEQFKIAEMNKDRLIELYGQCEFKRWLAELLDGQSQADI
VDVEAEGSAPAAAQVDTQYETILTKTQLDDWVTKLKAAELIAFDTETTSVNYMQAELVGM
SFAVAPGEAAYLPINHDYVGAPEQLSQDVVFEIMAPLLADPQIKKVGQNLKYDQSVLARA
GLELQGIAFDTMLESYVFNSVGTRHDMDSLALKYLGHKTISFEDIAGKGKNQLTFNQIEL
EKAAPYAAEDADITLRLHQHLWPLIEKENSLKQVFSEIELPLLSVLSRIERTGVHIDGDM
LAKQSIEIEKRLGELEQQAFEIAGEEFNLSSTKQLQAILFDKLELPVIKKTPKGAPSTAE
EVLQELAHDYPLPKLIIEHRGLAKLKSTYTDKLPKLVNADTGRVHTSYHQAVTATGRLSS
SDPNLQNIPIRNEAGRRIRQAFVADSNKQIVAADYSQIELRIMAHLSQDKGLLSAFAEGK
DVHSATASEVFSVPLEEVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDIPRNEAQHYMDMY
FERFPGVLEYMERTREEAADKGYVETLFGRRLYLPDINARNGARRKAAERAAINAPMQGT
AADIIKKAMIKVDEWLQSCDSNDIQLLMQVHDELVFEVHSDKVAEYSEKICELMSAAASL
DVPLLVEADSGDNWEQAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatccctcaaaatccgttgatcttggttgatggttcttcctatttatttcgt
gcttatcatgcgccaccacatttaacaaactcaaaaggtgaagcaactggtgcgatctac
ggtgtgatcaatatgcttaagagtttgcttaaacaatatcaaccaagtcatatggtagta
gtcttcgacgctaaagggccgacttttcgcaacgaaatgtatagcgagtataaagcgcat
cgcccgcctatgccggatgatctgagaacgcaaattgagccgatccacgaaataattaaa
gcaatgggtttgccactggtaagtataagtggtgtcgaggctgatgacgtgatcggtaca
ttctcaaaaatagcgtcagagcaaagtcgccatgtgctaatcagcactggtgataaggat
atggcgcaattggtcaatgaacatgtcacgttgatcaataccatgacaaatacgatctta
gacccagaaggggtggtggataagtttggcattggtcctgacctgatcatcgactatctc
gcgttaatgggagataaagtcgataatattccgggcgtacctggcgttggtgaaaaaacc
gcattagcgatgctacaggggttgggctctatcgattcgctctacgaaaacttagataaa
attgctgatttaggttttcgtggctcaaaaaccatggcgaagaaactagaggaacaccaa
gcgcagttaaaactgtcgtatgaattagccactattaagctggattgtgaagtagagcaa
gacttggagcaattcaagatagctgagatgaataaagatcgcttaatcgagctatatggt
cagtgtgaatttaagcgctggttagctgagttactggatggtcagtcacaagctgatatc
gttgatgtggaggctgaaggctcggcacctgcagcggcgcaggttgacacccaatacgag
acgattttgacaaaaacgcagcttgatgactgggtaactaagctaaaagctgcggaactc
atcgcctttgatactgaaaccaccagtgttaactatatgcaggcggaactagttgggatg
agctttgcagttgcaccaggcgaagcggcttacttaccaattaatcacgattatgtgggg
gcgcctgaacagctttctcaagacgttgtgtttgagatcatggcaccgctgcttgcggat
cctcagatcaaaaaagtgggtcaaaatttaaaatacgatcaaagtgtgctcgcccgagca
gggctggaactgcaaggtattgcttttgatactatgttggagtcttacgtatttaacagc
gtaggtactcgccacgatatggattccttagcactaaaatatttaggccataaaacaatt
agttttgaagacattgctggcaaaggtaaaaaccaactgacctttaaccaaattgagcta
gagaaggcggcgccttatgcagcggaagatgcggacattacgctgagattgcatcaacac
ctgtggccgttaattgaaaaagaaaatagcctaaagcaggttttttcagagattgaatta
ccgctactgagcgtactttctcgcattgaacgcaccggtgtgcacattgatggtgatatg
ctcgcgaagcaaagtatcgagattgaaaaacgcttgggtgagcttgaacaacaagctttt
gaaattgcaggtgaggagttcaacctgagttcaacaaagcaactacaagcgatattgttc
gacaaacttgagctgccagtgattaagaaaacgccaaaaggcgcgccttcaacggctgaa
gaagtgctacaagagttggcgcatgattatccgctgccaaaactgattattgagcaccga
ggcttggctaagctgaaatccacctataccgacaaattaccaaaattggttaatgcggat
actggtcgcgtgcacacttcttatcaccaagccgttaccgcaacgggccgtctaagctca
agcgatcctaacttgcaaaatattccgatccgcaatgaagctggacgtcgtattcgtcag
gcctttgttgccgacagtaataaacaaatcgtcgcggcggattacagccaaatcgagctt
aggatcatggcacatttgtcacaagacaaagggttgttgagtgcctttgctgaaggtaaa
gatgtacacagtgcaacagcatctgaagtattttccgtgccgctagaggaggtaacttct
gatatgcgccgcaaagccaaagcggttaactttggcttgatctatggcatgagtgcgttt
ggtctgtcacgtcagttagatattccaagaaatgaagcgcaacattatatggatatgtac
tttgagcgtttccctggcgtattagagtatatggagcgcacgcgtgaagaggctgctgat
aaaggatatgtagaaaccttatttggtcgtcgcttgtatctaccggatatcaacgcgcgt
aacggcgcccgcagaaaagcagcggaacgtgcagctatcaatgcaccgatgcagggcact
gcggcggatatcattaaaaaagcgatgattaaagttgatgaatggctacaaagctgtgat
agcaatgatatccagttactcatgcaagtacacgatgaattggtgtttgaagtacacagc
gataaagttgctgaatacagtgaaaaaatctgtgaattgatgagtgcagctgcatcactt
gatgtacctttattagtcgaagccgacagtggcgacaactgggaacaagcgcactag
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