Pseudoalteromonas piscicida: B1L02_02200
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Entry
B1L02_02200 CDS
T04942
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppis03036
]
B1L02_02200
Chromosome and associated proteins [BR:
ppis03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
B1L02_02200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ASD65969
LinkDB
All DBs
Position
1:461995..465384
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AA seq
1129 aa
AA seq
DB search
MRLSSIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA
MTDVIFNGSTKRKPISQASVELIFDNTQGRLPGTFADRNQIAIKRLVTRDGQSLYFLNGS
KCRKRDITDIFLGTGLGPRSYAIIEQGMISRLIESKPQELRVFLEEAAGISKYKERRRET
QTRIKSTRENMERLLDVRQELQGQLDKLALQAQQASEYKSLKSQERDLKSWIAILKWQSL
EQKQAIKAKEIAKLNEKLAFFNEAHSGHDSILATLEHEIKHFNDGYEQAQHSVHRIETQL
ATLEQQKVNLTDKKRQLIEQSQILKSQQQEVIEAQDEQAEYVASSAEKVDEVSEQLEIAL
LQLEEIQLTNEQSDAEQTQLEAQFSSAQKQYQQIHAKVQQGASQLAQQQQAKLHIEKRLV
ELQEQAEAHRASMLENDLAEAQDAHHQLVQAMAKLQSQAGKLQSQEQANKEEILLAESHA
QKALQALQEVQSEIKALSRWANEASETSATTMLSQLVVESGYEECVEAALLGLTHLVVEQ
SEINTLWPIELEVPCDSIATKISSGLFPSFLSKIKLCAEPTDFRSCEQFLLGVTKSGVIV
GDNFKAKAKSNEESGALKRYAQLQSCHIQLSHLQKLAEEAEQVVAQKRIALEDTQACLLK
TQQCVHEKAQAIASHKTKVEMLDENLSAWRELGQKIQEQLDIIAQERAEVIEQLELYTEQ
QLQRDELLAQAQETQQLAEAKLTEFKQHSQSRRAALQEAQQLVHTTKLTSQQAESELQLS
NSKLEHLQHRHDEINQRIEQTQEDILLCEEPLAEAHEDIELLLAQHLEAKAQKQTMLDTL
NQAKENLSQKQAALKDAQGEVSKLNASLQQVKLEEQSLMIKAQAALEPLQELGRTLKAEL
AQLPEDANLGQYQANLSRVSNDLGKLGAVNLAAIEEFEEAKARKTYLDTQLDDLTNALET
LEAVIRKIDKETKTRFSATFNQVNEDLAELFPKVFGGGSAYLELTSDDLLESGVSIMARP
PGKKNSTIHLLSGGEKALTALSLVFSIFRLNPAPFCMLDEVDAPLDDANVGRFCRLVEEM
SQTVQFIYISHNKVAMEMAGRLTGVTMAEPGVSRMVAVDIEQAVQMAQA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgagcagcatcaaactggccggctttaaatctttcgtagagccaaccaagatc
ccgtttcctgaccagatgacatgtgtggttgggccaaacggctgtggtaagtctaatgtt
attgatgcggttcgctgggtactgggtgaaagctcagcgaaaaacctccgtggcgatgcc
atgacggatgttatctttaacggttcaaccaaacgtaaacctatctcgcaagcttctgta
gaactgatttttgataatacccaaggccggttgcccggcacgtttgcagatcgtaatcaa
attgccattaagcgtttagtgacgcgagacggccagtctctttattttttaaatggtagt
aagtgccgtaagcgcgatatcacggatatctttttaggtaccggtttaggtcctcgtagt
tacgcaatcattgagcaagggatgatctctcgcttgattgaaagtaagccgcaagagttg
agagtttttttagaagaagccgctggaatttcaaaatataaagagcgtcgtcgagaaacc
caaacccggatcaaaagtacccgcgaaaacatggagcgtttgctcgatgttaggcaagag
ctccagggccagctagataaactggcacttcaagcacaacaggcgagcgaatataagtct
ttaaagtcgcaggagcgagacttaaagtcgtggatagcaattttaaaatggcaaagcctt
gagcaaaagcaggcaataaaagccaaagaaatcgccaaactcaacgaaaaattagcattt
ttcaatgaagctcacagtggccatgacagcattttggcgacgctagaacatgaaattaag
catttcaatgatggttatgagcaagcacaacatagcgtgcaccgaattgaaacccagttg
gcaacgcttgagcaacagaaagtcaatctaacagataaaaagcgtcagcttattgagcag
tctcaaatactgaaatcgcaacagcaagaagtgattgaggcgcaagacgagcaagccgag
tatgtggcgagcagtgctgaaaaagtcgatgaagtttctgaacaacttgagattgcgcta
ttgcaattggaagaaattcagctcacaaacgagcaaagtgacgccgagcaaactcagtta
gaagcgcagtttagtagcgcacagaagcagtaccaacaaatacatgctaaggtacagcaa
ggggcaagccaattagcgcaacaacagcaagctaaactgcacatagagaagcgtctggtt
gagctgcaggaacaggccgaagcgcatcgcgcatctatgttggaaaatgacttggctgaa
gctcaggatgcacatcatcagctagttcaagcgatggctaaattacaaagccaagctggt
aagttgcaaagccaagagcaagccaataaagaggaaatcttactggcggaaagtcatgct
caaaaagcgcttcaggcgttacaagaagtgcaatctgaaataaaggcgttatcacgctgg
gcaaacgaagcgtctgagacttcagctacgactatgttatcgcaacttgttgtcgagtct
gggtatgaagaatgcgtggaagcggcattgcttgggttaacgcatttagtcgtcgagcaa
agcgaaataaatacgctatggcccatcgaactcgaagttccctgtgattcaatcgcgaca
aaaataagctcaggactgtttcccagttttttatcaaaaataaaattatgcgctgaacct
acggactttagatcgtgtgaacaattccttctcggtgtgacgaaaagtggtgttattgtg
ggtgataactttaaggcaaaagcgaaaagcaatgaagagagtggtgcgttaaaacgctat
gcccaattgcagtcatgccatattcagctttctcacctgcaaaaactcgctgaagaggcc
gagcaggttgtagcacaaaaacgcattgcccttgaggacacgcaagcttgcttgttgaaa
acacagcaatgcgttcacgaaaaggcacaagcaatcgccagccataaaactaaagttgaa
atgctggatgagaatctgagcgcttggcgtgagctaggacaaaaaattcaggaacaactt
gatatcattgctcaagaacgagctgaggtcatcgaacaacttgaactttatactgaacag
caattacaacgtgatgagttactagcgcaagcacaagaaacacaacaactggccgaggct
aagttgactgagtttaaacaacatagtcaatctcgacgcgccgcattacaagaagcgcag
caattagttcatacgactaaacttacgtcgcagcaggcagaaagtgagctacagctcagc
aattctaagttagaacacttgcaacatcgtcacgatgaaataaatcagcgcatcgagcaa
acacaagaagatattttactttgtgaagagccgctcgcggaggcgcatgaagacattgaa
ttattgctcgcccaacatttagaagccaaggcgcaaaagcaaacgatgttggatacgctc
aaccaagccaaggaaaacctctcccaaaaacaagctgcattaaaagatgcacaaggcgaa
gtgagtaaactcaatgcgtctttgcaacaagtgaaacttgaagagcaaagcttgatgata
aaggcgcaagcggcacttgaacccttgcaggagcttggtcggacgctaaaagcggaactg
gcgcaattacccgaagacgcaaacttgggccagtatcaagccaatttgagtcgagtcagt
aatgatcttggtaagttaggggctgtaaacttagcggcaattgaagagtttgaagaggcg
aaggcacgtaaaacctatttagatacacagctagatgatctcactaatgcgttagaaacg
ttagaagcggtgatcagaaaaattgataaagagaccaaaacccgtttcagtgccaccttt
aatcaagtaaatgaagacttagctgagttgtttcctaaagtatttggtggggggagtgca
tatctagaattgactagcgatgacctactcgaaagtggtgtttctatcatggcgaggccg
ccaggtaagaaaaactcgacaattcatctgttaagtggtggagaaaaagcgctgaccgca
ttatcattggtgttttcaatattcaggcttaatccagccccattctgtatgctggatgaa
gtagatgcaccgcttgatgacgcaaacgtagggcgattttgtcgtttggttgaagagatg
tcgcaaacagtgcaatttatttatatcagtcataataaggtcgctatggaaatggcgggt
agactgacgggggtaaccatggcagaacctggggtgtcgcgtatggttgccgtagatata
gaacaagcggtgcaaatggcacaggcataa
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