Pseudoalteromonas piscicida: B1L02_04595
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Entry
B1L02_04595 CDS
T04942
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_04595
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
B1L02_04595
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
AAA
SLFN-g3_helicase
DZR
AAA_30
AAA_16
TniB
T1R_D3-like
Zn_ribbon_TFIIB
Zn_Ribbon_1
DUF7577
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
ASD66387
UniProt:
A0AAD0RKB4
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All DBs
Position
1:972386..974128
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AA seq
580 aa
AA seq
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MLIYVLRPYQQEAVQNTLAHFRKSSDSAVIVLPTGAGKSLVIAELARLAKHKILVLTHVK
ELVEQNAKKYKSYGLQASIFSAGLKEKSLQHQVTFASVQSLSRNLSQLNQFYSLVIIDEC
HRVSGEDNSQYQQILNQLAQFNPELKLLGLTATPYRLGMGWIYHKHYHGFVRGKAESPFK
QCIYELPLRYMIKNSYLTPPNKIDPAVENYDFSSLSTDSFGRYSESDMNTLLQAQTRATK
SIITHLLELSENRVGVMIFAATVMHAKEILGYLPEQNSALITGETKSAVRDALIVQFKNR
EIKYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLDENKEDCFVIDYAGN
DFDLFAPEVGSKKPNSDSEPIQVLCPGCGFANIFWGKVDEQGKLIEHFGRRCQGLLEDDD
GHSQQCDYRFKFKECEQCGAENDIAARQCHQCGGIMADPDDKLRAALNLKHAMVLRCSGL
CSEVVSGNKLKVTYFDEDGASCSEVYDFSNQKSLFIFHQQFAKRRKSTSVPAKWQSAEDV
VDADLIAPDFVIAKLHKKFGWQVSEKLFDYQGSYRKADKS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatttacgttttaagaccttatcaacaagaagcggtacaaaatacactggcgcac
tttcgcaaatctagtgactcagccgtcatcgttttgcctactggggccggaaagagcttg
gtcattgcagagcttgcaaggcttgcgaagcacaaaatattagtgttgactcatgttaaa
gaacttgtagagcaaaatgcaaaaaaatataaaagctatggattacaagcaagtatcttc
tctgcgggtttaaaagaaaagtcgttgcagcatcaagtgacttttgccagtgtgcagtca
ttgtctcgaaatttgtcacaacttaatcaattttattcattagttatcattgacgaatgt
caccgagtgagtggtgaagataatagtcagtatcagcaaattttaaatcaattggcccaa
tttaatcctgaactaaagttactgggtttaacagcaacaccttaccgcctgggtatgggg
tggatatatcataagcattatcatggttttgttagagggaaagcagagtcaccatttaag
cagtgtatttatgaattaccacttagatatatgataaaaaattcgtatcttacaccgcct
aataaaattgatccggccgttgagaactatgatttttctagtttaagtacagattcattt
gggcgttattcagaatctgacatgaatacattattacaagctcaaactcgtgcaacaaag
agcattatcactcacttattggagctcagtgaaaatagggtaggcgtaatgatttttgcc
gcgacggttatgcatgcaaaagaaattctcggctatttacctgagcaaaatagtgcgctg
ataacgggtgaaaccaaatctgccgtgagagatgcacttatcgtccaattcaaaaatagg
gaaattaagtatttagttaatgtttctgtgctgaccaccgggtttgacgccccccatgtc
gatgtcatcgctatcttgagacccacggagtccgttagtctttatcagcagatagtaggc
agaggacttaggctagacgaaaacaaagaagattgctttgtcattgactatgcgggcaac
gactttgacttatttgctcctgaagtggggagcaaaaagccaaactcagacagcgagcca
atacaggtgctttgtcctggttgtggttttgccaatattttctggggcaaggtagacgag
caaggcaagcttattgagcattttggcaggcgttgtcagggattgcttgaagatgatgat
ggtcactcacagcaatgtgactatcgttttaagtttaaagaatgtgagcagtgtggagca
gaaaatgatattgctgcaaggcaatgccatcagtgcggtgggataatggcagacccagat
gataaactccgcgcggcactgaatttaaaacatgcaatggtactgcgttgcagcgggcta
tgtagcgaggtagtcagtggcaataaattaaaagtcacttactttgatgaggatggtgca
agttgcagtgaagtctatgacttttctaatcaaaagagtttatttatattccatcagcaa
tttgcaaagcggcgcaagtctacatcggtacctgcgaaatggcagtctgctgaagacgtg
gtagatgctgacttgattgcaccagattttgtgattgctaaattgcataagaagtttggt
tggcaggtttctgaaaagctgtttgattaccaaggaagctacagaaaggctgacaaaagt
tag
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