KEGG   Pseudoalteromonas piscicida: B1L02_04595
Entry
B1L02_04595       CDS       T04942                                 
Name
(GenBank) ATP-dependent helicase
  KO
K19789  DNA repair protein RadD
Organism
ppis  Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:ppis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppis03400]
    B1L02_04595
DNA repair and recombination proteins [BR:ppis03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     B1L02_04595
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 AAA_22 AAA SLFN-g3_helicase DZR AAA_30 AAA_16 TniB T1R_D3-like Zn_ribbon_TFIIB Zn_Ribbon_1 DUF7577 zf-tcix
Other DBs
NCBI-ProteinID: ASD66387
UniProt: A0AAD0RKB4
LinkDB
Position
1:972386..974128
AA seq 580 aa
MLIYVLRPYQQEAVQNTLAHFRKSSDSAVIVLPTGAGKSLVIAELARLAKHKILVLTHVK
ELVEQNAKKYKSYGLQASIFSAGLKEKSLQHQVTFASVQSLSRNLSQLNQFYSLVIIDEC
HRVSGEDNSQYQQILNQLAQFNPELKLLGLTATPYRLGMGWIYHKHYHGFVRGKAESPFK
QCIYELPLRYMIKNSYLTPPNKIDPAVENYDFSSLSTDSFGRYSESDMNTLLQAQTRATK
SIITHLLELSENRVGVMIFAATVMHAKEILGYLPEQNSALITGETKSAVRDALIVQFKNR
EIKYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLDENKEDCFVIDYAGN
DFDLFAPEVGSKKPNSDSEPIQVLCPGCGFANIFWGKVDEQGKLIEHFGRRCQGLLEDDD
GHSQQCDYRFKFKECEQCGAENDIAARQCHQCGGIMADPDDKLRAALNLKHAMVLRCSGL
CSEVVSGNKLKVTYFDEDGASCSEVYDFSNQKSLFIFHQQFAKRRKSTSVPAKWQSAEDV
VDADLIAPDFVIAKLHKKFGWQVSEKLFDYQGSYRKADKS
NT seq 1743 nt   +upstreamnt  +downstreamnt
gtgcttatttacgttttaagaccttatcaacaagaagcggtacaaaatacactggcgcac
tttcgcaaatctagtgactcagccgtcatcgttttgcctactggggccggaaagagcttg
gtcattgcagagcttgcaaggcttgcgaagcacaaaatattagtgttgactcatgttaaa
gaacttgtagagcaaaatgcaaaaaaatataaaagctatggattacaagcaagtatcttc
tctgcgggtttaaaagaaaagtcgttgcagcatcaagtgacttttgccagtgtgcagtca
ttgtctcgaaatttgtcacaacttaatcaattttattcattagttatcattgacgaatgt
caccgagtgagtggtgaagataatagtcagtatcagcaaattttaaatcaattggcccaa
tttaatcctgaactaaagttactgggtttaacagcaacaccttaccgcctgggtatgggg
tggatatatcataagcattatcatggttttgttagagggaaagcagagtcaccatttaag
cagtgtatttatgaattaccacttagatatatgataaaaaattcgtatcttacaccgcct
aataaaattgatccggccgttgagaactatgatttttctagtttaagtacagattcattt
gggcgttattcagaatctgacatgaatacattattacaagctcaaactcgtgcaacaaag
agcattatcactcacttattggagctcagtgaaaatagggtaggcgtaatgatttttgcc
gcgacggttatgcatgcaaaagaaattctcggctatttacctgagcaaaatagtgcgctg
ataacgggtgaaaccaaatctgccgtgagagatgcacttatcgtccaattcaaaaatagg
gaaattaagtatttagttaatgtttctgtgctgaccaccgggtttgacgccccccatgtc
gatgtcatcgctatcttgagacccacggagtccgttagtctttatcagcagatagtaggc
agaggacttaggctagacgaaaacaaagaagattgctttgtcattgactatgcgggcaac
gactttgacttatttgctcctgaagtggggagcaaaaagccaaactcagacagcgagcca
atacaggtgctttgtcctggttgtggttttgccaatattttctggggcaaggtagacgag
caaggcaagcttattgagcattttggcaggcgttgtcagggattgcttgaagatgatgat
ggtcactcacagcaatgtgactatcgttttaagtttaaagaatgtgagcagtgtggagca
gaaaatgatattgctgcaaggcaatgccatcagtgcggtgggataatggcagacccagat
gataaactccgcgcggcactgaatttaaaacatgcaatggtactgcgttgcagcgggcta
tgtagcgaggtagtcagtggcaataaattaaaagtcacttactttgatgaggatggtgca
agttgcagtgaagtctatgacttttctaatcaaaagagtttatttatattccatcagcaa
tttgcaaagcggcgcaagtctacatcggtacctgcgaaatggcagtctgctgaagacgtg
gtagatgctgacttgattgcaccagattttgtgattgctaaattgcataagaagtttggt
tggcaggtttctgaaaagctgtttgattaccaaggaagctacagaaaggctgacaaaagt
tag

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