Pseudoalteromonas piscicida: B1L02_04690
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Entry
B1L02_04690 CDS
T04942
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppis01011
]
B1L02_04690
Enzymes [BR:
ppis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
B1L02_04690
Peptidoglycan biosynthesis and degradation proteins [BR:
ppis01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
B1L02_04690
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
LysM_OapA
LysM3_NFP
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
ASD66404
UniProt:
A0AAD0RQP7
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Position
1:complement(990592..992166)
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AA seq
524 aa
AA seq
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MKKLAFIIASSAILSGCEITQETPLETATEQMKQANLDHASPYDISQTLSTSWQDEDEEA
VPVFDDVWERIRYQLSIEVPQNRPVVAERNYYQRHQAYLDRIAKRAEPYLYYIVEEVEKR
NMPVEIALLPIVESAFDPFGYSHRTASGIWQFMPQTGERFNLKQNWWYDGRRDIIASTQA
ALDYLTYLHKTLEGDWLNAIAAYNSGEGRLLRAIRKNRKKHLPTDFWSLDLPRETTAYVP
KLLALSDLLKRSDEFNVAWQPIINAQVVDTVEVGSQIDLALAAEMAGISLTELYRLNPGF
NRWATDPDGPHQLLLPMEKVEAFQEKLAKTEVKDRLRWQYYTVQKGDSLSVVATKFNTSI
GAIRSLNSIDGNMIRVGQKLLVPLSDGELQSEHLPPEVRLAANKVTKKKLSHTVKSGDTL
WDISREYDVTVKQLASWNKLKTNAVLRLGQKLTVFKDEKAADQTVLVNTERTITYKVRKG
DSLARIATKFNVSVNEIVKWNNLTGQKYLQPGQKLKLKVQTKRV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctcgcctttattattgcatcatcagcaatattaagtggttgtgaaatcacg
caagaaacaccattggaaactgcaactgaacaaatgaagcaggccaacttagatcacgcg
agcccttatgatatatctcaaacactcagtacctcatggcaagacgaagatgaagaggct
gtgcctgtatttgatgatgtatgggagcggatccgttatcagttatctatcgaagtaccg
caaaatcgaccagttgtcgccgaacgtaattactatcaacgtcaccaagcctatttagac
cggattgcaaaacgtgcagagccttacctctactacattgttgaagaagtagaaaagcgt
aatatgcctgttgaaatcgcgttgttacctattgtggaaagcgcattcgatccatttggc
tattcacaccgcaccgcttccggtatttggcaatttatgccacaaaccggtgaacgcttt
aacctcaaacaaaattggtggtatgacggtcgtcgcgatattatcgcatcaacgcaagcg
gcacttgattatctcacctatctccataaaacactggaaggcgactggttaaacgcaatt
gccgcttacaattcaggtgaaggtcgattgctcagagcaatccgaaaaaatcgtaaaaag
catttacctaccgatttttggtctctcgatttacctcgggaaaccaccgcgtatgttcct
aaattactcgccttgtccgacctattaaaacgctcagatgagtttaacgtcgcgtggcag
cctataatcaatgcccaagttgttgacaccgtagaggtaggatcacagattgatttagcg
cttgccgctgaaatggctggtatttctttaactgaactctatcgcctgaatccagggttt
aatcgttgggccaccgatccagatggtccgcaccagttattattacccatggaaaaggtt
gaggcttttcaagagaaactagctaaaacagaagtaaaagatcggcttcgttggcaatat
tatacggtgcaaaaaggagatagtctgtcggtcgtcgcgactaagtttaatactagtatc
ggcgccattcgctcactcaatagcatcgatggaaatatgatccgtgttgggcagaagcta
ttggtgccactcagtgatggcgaattgcaaagtgagcatttaccaccagaagtgcgcctt
gccgccaacaaagtaaccaagaaaaagctcagccacacggtaaaatcaggcgatacattg
tgggatatcagccgcgaatatgatgtgacggttaagcaattagctagctggaataagtta
aaaaccaatgcggttttgcgccttggacaaaagcttaccgtgtttaaagatgaaaaggca
gcggatcaaaccgtactcgtcaacactgagcgcacaatcacttataaagtgcgtaaaggc
gactcactagcacgtatcgccactaaatttaacgttagcgtgaatgaaatcgtcaaatgg
aacaacctgactggacaaaagtatctccagccaggtcagaagttaaaactgaaagttcag
acaaaacgtgtttag
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