Pseudoalteromonas piscicida: B1L02_05230
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Entry
B1L02_05230 CDS
T04942
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppis03032
]
B1L02_05230
03036 Chromosome and associated proteins [BR:
ppis03036
]
B1L02_05230
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_05230
DNA replication proteins [BR:
ppis03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B1L02_05230
Chromosome and associated proteins [BR:
ppis03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
B1L02_05230
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
B1L02_05230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ASD68863
LinkDB
All DBs
Position
1:1093349..1093621
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDQIAADADISKAAAGRALDSFIESVTGALKDGDSVALVGFGTFSVRERAARSG
RNPQTGETIQIAAANIPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaattaatcgatcaaatcgcagctgatgctgacatttctaaagcggct
gctggtcgtgcgctagattcattcattgagtctgtaacgggtgcactaaaagacggtgac
tctgttgcacttgtaggttttggtactttctcagtgcgcgagcgtgctgcacgttctggt
cgtaacccacaaactggtgagactattcaaatcgcagcagctaatatcccatctttcaaa
gcgggtaaagcgcttaaagacgcagtaaactaa
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