Pseudoalteromonas piscicida: B1L02_05460
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Entry
B1L02_05460 CDS
T04942
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ppis
Pseudoalteromonas piscicida
Pathway
ppis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1L02_05460 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_05460 (recO)
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1L02_05460 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B1L02_05460 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ASD66527
UniProt:
A0AAD0RJB3
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All DBs
Position
1:1136055..1136747
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AA seq
230 aa
AA seq
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MDSDFRQAYLLHRRPYSDSQVLLDVLVEGVGQLKMLARVKGKQSLKHNAQLRPFSLLLLQ
YAGRYDFKYVNRFEPTDNQIQLVGRQLYCGLYLNELTQRVVPTNEPLEQIFALYQLHLMR
LAQDEDVEPILRSFELQLLGELGFGVELEFDAEGNPVRPKAAYKYVSEYGFIAVGREPDT
IPGSMLLAIANQDFQDLAVRRAAKLLTRKLMAPLVGKQGLKSRELFISKK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttggatagcgactttcgacaggcctatctgttacatcgcagaccttacagcgattctcag
gtactgcttgacgtactagtcgaaggcgttggacaactcaaaatgcttgcccgagtaaag
ggcaagcaatccctcaaacataatgcccagttgcggccattttcattacttttactgcaa
tatgcaggcagatacgattttaaatacgtaaaccgttttgaacccacagacaaccaaatc
caactcgttgggcggcagttatattgtggcttgtatctcaatgagctaacacaacgcgtg
gtacccaccaacgaaccgctagagcagatctttgcgctctatcagttacatttaatgcgt
ttggcccaagatgaagatgtcgaacctatcttacgcagctttgagttgcaattattgggt
gaacttgggtttggtgtggaactggagtttgacgcagaaggtaatccagtgcggccaaaa
gccgcgtataagtacgtatctgagtatggttttattgcagtcggtcgtgaacctgatacg
ataccgggcagtatgttactagccattgccaatcaagatttccaagaccttgccgtgaga
agggcggctaagctattaacacgaaaattaatggcaccgctggttggtaagcaagggctg
aaaagtagagagctatttatttcaaagaaataa
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