Pseudoalteromonas piscicida: B1L02_07970
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Entry
B1L02_07970 CDS
T04942
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppis03032
]
B1L02_07970
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_07970
Enzymes [BR:
ppis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B1L02_07970
DNA replication proteins [BR:
ppis03032
]
Prokaryotic type
DNA Topoisomerases
B1L02_07970
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B1L02_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ApbA
WDR55
Motif
Other DBs
NCBI-ProteinID:
ASD66965
UniProt:
A0AAD0RH98
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All DBs
Position
1:1682614..1685286
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AA seq
890 aa
AA seq
DB search
MSDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKVAHELLADLEKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAVIQNPDITIEELIDYIPGPDFPTAAIISGKNGIEQAYKTGRGKI
YIRAKADIEVDEKTGKETIIVHEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG
MRIVIEIKRGEVGEVVLNNLYAQTQLQTVFGINMVALDNNQPKCFNLKEMLDAFIIHRRE
VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKAALTARAWDLGNV
KSMLERTGEENVARPDWLAEELGIRDGQYYLSEQQAQAILDLRLHKLTGLEHEKILAEYK
ELLDLIAELLYILSSPERLMEVIRDELVEIKETYGDERRTEITAAAHDISLEDLINEEDV
VVTLSHEGYVKYQPLSDYEAQRRGGKGRSATKMKDEDFIERLLVANTHDTILCFSTSGRL
YWLKVYQLPLASRAARGKPIVNLLPLEADERITTILPVREYEEDKFIVMATASGIVKKTP
LTAYSRQRASGIIAINLNEGDSLIGANITTGENDIMLFTEHGKVVRFNEKQRDSETGEVK
RDPETGEEMLALRPMGRTATGVRGIKMPDDVKVVSLIVPQGDGAILTVTENGYGKRTPLA
EYPAKSRATQGVVSIKVTERNGSVVGAVQVDDNDEIMLISNRGTLVRTRVNEVSTVGRNT
QGVILIRTMEDEKVVGLQRIEEIEVEELPEGDVAELEGEATPAAEPDAEE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctcgccaatgaaatcctgccagtcaatatcgaagatgaattaaaaaattca
tacctagattatgcgatgagtgtaatcgtaggtcgtgcattacctgacgtacgtgacggc
cttaagcctgttcaccgtcgtgtattgttcgcgatgaatgaacttaaaaatgactggaac
aaaccttataaaaagtcagctcgtgtagttggtgacgtaatcggtaaatatcacccacat
ggtgatagcgcggtttacgatactattgtacgtatggctcagcctttttctctacgctat
atgctagtagatggacaaggtaactttggttctgtcgatggtgactctgcagctgcgatg
cgttataccgaagtacgtatggctaaagtcgctcacgagttacttgctgaccttgaaaaa
gaaaccgttgattatgtaccaaactacgatggtacagagcaaattccagatgtgttacca
actaaagtgcctaacctattggtgaatggttcatctggtatcgcggttggtatggctacc
aatattccacctcacaatttaacagaggtgatcaatgggtgtttggctgtgatccagaat
ccagacatcaccattgaagagttaatcgattatattccgggtcctgatttcccaactgcc
gctatcattagcggtaaaaatggcatcgaacaagcctataaaacaggtcgtggtaagatt
tatatccgcgcgaaagctgacatcgaagtcgatgagaaaacaggcaaagaaaccatcatc
gttcatgaaattccttaccaggttaacaaggcaagattaatcgaaaagatcgcagaactt
gttaaagacaaaaaggttgaagggattagtgcactacgcgacgagtcggataaagacggt
atgcgtattgttattgaaatcaaacgtggtgaagtaggtgaagttgtactaaacaaccta
tacgctcaaacacaactacaaactgtgtttggtatcaatatggttgcgctagataacaac
cagccaaagtgtttcaacctaaaagaaatgctcgatgcgtttatcattcaccgtcgtgaa
gtcgtaacgcgtcgtactgtatttgatcttcgtaaggcaagagacagagcgcatacgctt
gaaggcctagcaattgcgctagcaaacattgaccctatcattgagcttattcgtaagtca
ccaacaccagcggaagcgaaagcggcgcttacggcgcgagcttgggatcttggtaacgtt
aaatcaatgcttgagcgcactggcgaagaaaatgttgcacgtccagactggttagctgaa
gaactcgggatccgtgacggtcagtattatttgtctgagcaacaagcccaagcaattctt
gacttaagactacacaaattaacgggtcttgagcacgagaaaattctggcagaatacaaa
gagctactcgatcttatcgctgaactactgtatatcctttcctctccagaacgtttgatg
gaagtgatccgtgatgagcttgtcgaaatcaaagaaacatatggtgatgagcgtcgtaca
gagatcactgctgcagcgcacgatatcagtctagaggatttgatcaacgaagaagacgtt
gtcgttacgctttctcacgaaggctacgtgaaatatcaacctcttagcgattacgaagca
cagcgtcgtggtggtaaagggcgatctgcaactaagatgaaagatgaagactttatcgaa
cgtctactcgttgcaaatactcacgatacaattctttgtttctccacttcggggcgctta
tattggttaaaagtttaccagttgccgctcgcatcacgtgctgcgcgcggtaagccaatt
gttaacttgttaccactcgaagctgatgagcgtattacgacaattttaccggttcgtgaa
tacgaagaagataagtttatcgtcatggcaacagcgagtggtatcgttaagaaaacacct
ctgactgcatacagccgtcagcgtgcaagcggtattattgctatcaacttgaacgaaggc
gatagcctcatcggtgctaacattaccacaggtgaaaatgacatcatgctatttactgag
catggtaaagttgtacgctttaatgagaagcagcgagattcagaaacgggtgaagtgaag
cgtgatcctgaaactggcgaagaaatgttggctttacgtcctatgggccgtacagctact
ggtgttcgtggtatcaagatgccagatgacgttaaagtggtatcactaatcgtaccacaa
ggcgatggtgcaatcttgaccgtaactgaaaatggttatggtaagcgcacaccgcttgca
gagtaccctgcgaagagccgtgcaacacaaggtgttgtgtcaatcaaagtaacagaaaga
aatggttctgtggttggcgcggttcaagttgatgacaacgatgaaatcatgttgatctca
aaccgtggtacgctagttagaacgcgcgtaaacgaagtttctacggtaggccgtaacacc
caaggtgtgattctgatccgtacgatggaagacgagaaagtagttggtcttcaacgcatc
gaagaaattgaagtggaagagttgcctgagggtgacgttgcagagctagaaggtgaagca
acacctgctgcggaacctgacgcagaggaataa
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