Pseudoalteromonas piscicida: B1L02_07995
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Entry
B1L02_07995 CDS
T04942
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppis03032
]
B1L02_07995 (ihfB)
03036 Chromosome and associated proteins [BR:
ppis03036
]
B1L02_07995 (ihfB)
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_07995 (ihfB)
DNA replication proteins [BR:
ppis03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B1L02_07995 (ihfB)
Chromosome and associated proteins [BR:
ppis03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
B1L02_07995 (ihfB)
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
B1L02_07995 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ASD66970
UniProt:
A0A0F4NVI2
LinkDB
All DBs
Position
1:1690656..1690946
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AA seq
96 aa
AA seq
DB search
MTKSELIEQLALQHAHVPVKDVENAVKEILEQMAGSLSDSERIEIRGFGSFSLHFRSPRT
GRNPKTGETVELDGKYVPHFKPGKELRDRVNESLNN
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtctgaattgatagaacaacttgcactgcagcacgctcacgttcctgttaaa
gatgtagagaatgcggtaaaagaaatccttgaacaaatggctggctcattatcagactcg
gagcgtatcgaaatccgtggctttggtagtttctcgcttcacttccgttctcctcgcact
ggtcgtaatcctaaaacgggcgagacagtagaattggatggtaaatacgtaccacacttt
aagccaggcaaagagctgcgcgatagagtaaacgaaagcttaaataattaa
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