Pseudoalteromonas piscicida: B1L02_12405
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Entry
B1L02_12405 CDS
T04942
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppis03016
]
B1L02_12405
Enzymes [BR:
ppis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B1L02_12405
Transfer RNA biogenesis [BR:
ppis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B1L02_12405
Prokaryotic type
B1L02_12405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF5063
Motif
Other DBs
NCBI-ProteinID:
ASD67741
UniProt:
A0AAD0RHY5
LinkDB
All DBs
Position
1:complement(2659382..2660329)
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AA seq
315 aa
AA seq
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MARRTKGRAIDGILLLNKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAQLGERTTTSDSDGEIVETRPVDITLEQLEREIASFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRKINVYRITLDEYDEQTQQIQMTVHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSEVGHYPSDKMITLVELEALLEKAKAEEVAPSTYLDE
LLLPMDTALVDLTVVDITTEQGIAFGHGQTVAVANLPDGIVKVVADGKFVGIGERNPQGL
LKAKRALSSAPPESQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgcaccaaaggccgtgcgattgacggcattctgttattaaataagccgcaa
ggtatttcttctaacaaagcactgcagcaagcgaaaggcatctatttcgctcagaaagcg
ggccacactggtgctttggatccgttggcaacaggtatgttgccaatttgctttggtgaa
gcaactaagtttacccaatttttgcttgatactgataaaacctacgtggtgagagcacag
ctgggtgagcgtacaacgacatctgattctgatggtgaaattgttgaaacgaggccagtg
gatattacgcttgagcagctagagcgagaaattgccagcttcttgggtgaatctgatcaa
tacccttcgatgtattcggcgctcaaatatcagggccaaccgttatacaaatatgctcga
gaaggcatcgaagtaccgcgtaaatgccgtaagatcaatgtttaccggattacgttagac
gaatatgacgagcaaactcaacaaattcaaatgacggtacatgtgtctaaaggcacctat
attcgtacgatagtcgatgatttaggtgaaaaacttggctgtggtgcgcatgttattatg
ttacaccgtagtgaagttggtcattatcctagcgataaaatgattaccttagtcgagctg
gaagctttacttgaaaaagcaaaagcggaagaagtcgcaccttccacttatttagatgaa
ttattgttgccgatggataccgctctggttgacctgactgttgtcgatattactactgaa
caaggtatcgcgtttggtcatggtcaaaccgttgcagtggccaacttacctgacggtatt
gttaaagtcgttgcagacggtaagtttgttgggattggcgagcgtaatccgcaagggtta
ttgaaagcaaaacgggcgctctcttccgctccaccagaatcgcaataa
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