Pseudoalteromonas piscicida: B1L02_13150
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Entry
B1L02_13150 CDS
T04942
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_13150
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1L02_13150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
DUF7125
SLFN-g3_helicase
AAA_22
nSTAND_NTPase5
Rad51
AAA_16
RecA_N
AAA_14
AAA
ABC_tran
Zeta_toxin
GvpD_P-loop
Viral_helicase1
DUF6549
NTPase_1
KdpD
AAA_24
T2SSE
AAA_33
nSTAND3
AAA_19
CSS-motif
PAXNEB
cobW
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ASD67874
UniProt:
A0AAD0RHQ3
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All DBs
Position
1:complement(2828407..2829777)
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AA seq
456 aa
AA seq
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MAKKKTAFVCSDCGAEFARWQGQCSECKAWNTVTEFRVPSAKSVPQGGATSGYAGLVEAK
VQTLDEVNLEQLPRFSTGFKEFDRVLGGGVVPGSAILIGGSPGAGKSTVLLQTMCRLAET
MNTLYVTGEESLQQVAMRATRLGLPTNKLKTLAETNVETICQLALREKPSIMVIDSIQVM
HMSDIQSAPGSVSQVRESAAYLTRFAKTNQVAIIMVGHVTKDGTLAGPKVLEHCIDCSIL
LEGSADSRFRTLRGNKNRFGAVNELGVFAMTSQGLKEVNNPSAIFLNRGEAQTPGSLVMV
IWEGTRPLLVEVQALVDYSQLANPRRVTVGLEQNRLAMLLAVLHRHGGLQVSDQDVFVNV
VGGVKVTETSADLALIAALVSSFKNQTLDRQLVVFGEVGLGGEIRPVPSGQERLREASKH
GFTRAIVPKANKPKENIEGMEIVAVSSLSEALEALF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaaaacagcatttgtatgtagcgattgtggtgccgaattcgcacgttgg
caaggacagtgttctgagtgcaaggcatggaataccgtaacggagtttcgcgttccgtca
gcaaagtcagtccctcaaggcggtgcaacttcaggctatgccggtcttgttgaagctaaa
gtacaaaccttagatgaagttaacttagaacaattaccgcgattttcaacaggctttaaa
gagtttgaccgtgtactaggtgggggcgttgttccaggaagtgcaatactaattggtggt
agcccaggtgcaggtaaaagtacggtactgctgcaaaccatgtgtcgcctcgccgaaacc
atgaacactttgtatgtcaccggtgaagagtcgctgcaacaagttgccatgcgtgcgaca
cgattggggctgccgacaaataagttaaaaacactcgcagaaaccaatgtcgagacgatt
tgtcagctcgcgcttcgtgaaaaaccaagcattatggttatcgactcaattcaagtaatg
cacatgagtgatatccaatcagcaccgggatcggtttctcaagtgcgtgaaagcgctgca
tatttgacgcgttttgccaaaacaaatcaggtcgccattatcatggtggggcatgtgact
aaagatggcactctggccggccctaaagtgttagagcattgtattgactgctccatttta
ctggaaggcagcgccgatagccgctttagaacattgcggggcaataaaaaccgttttggt
gccgtaaacgagttaggtgtgtttgccatgacaagccaaggcttaaaggaagtaaacaat
ccgtcggccattttcttaaatcgtggcgaagcgcaaacgccaggctcactggtcatggtt
atttgggaaggcacacgaccgttactcgtggaagtacaagcactagtcgactactcacaa
ttggccaatcctcgtcgtgtcaccgttggcttggaacaaaatcgtttagccatgctactt
gcggtactgcatcgtcacggtggtttgcaagtgtcggatcaagacgtgtttgtaaacgta
gtgggcggtgtcaaagtgaccgaaaccagcgccgatttggccttaatagccgcactggtt
tcaagctttaaaaaccaaacattagacaggcagctggtggtatttggtgaggtggggcta
ggtggtgagatccgccctgtgccaagtgggcaagagcggttgcgtgaagcatccaagcat
ggctttacaagagcgattgtaccaaaagcaaataaaccaaaagaaaatatagaggggatg
gaaattgtagccgtctctagccttagcgaagcgcttgaggcacttttttaa
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