Pseudoalteromonas piscicida: B1L02_13965
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Entry
B1L02_13965 CDS
T04942
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppis03021
]
B1L02_13965
Transcription machinery [BR:
ppis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1L02_13965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
DUF6279
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ASD68002
UniProt:
A0A3B6Y5D6
LinkDB
All DBs
Position
1:complement(3004110..3005090)
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AA seq
326 aa
AA seq
DB search
MAHTAKLPTKSTPESDKFDDDNIDEPKDELLEDLEDDEEVFAKEEVVKNLDATQLYLGEI
GFSPLLSAEEEVYFARKALKGCEASRKRMIESNLRLVVKIARRYNNRGLALLDLIEEGNL
GLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTAREL
TQKLDHEPTAEEIAECLDKPVEEVSKMLRLNEKITSVDTPIGGENDKALLDIIADEKGGG
PETEVQSNDINKHIVDWLGELNPKQREVLARRFGLLGYEPSTLEDVGREIGLTRERVRQI
QVEALRRLKDILQHEGLSTDSLFEQQ
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggctcacactgcaaaattacctacaaaatctactccagagtcagataagttcgacgat
gataatattgacgaaccaaaagacgaattacttgaagacctcgaagacgacgaagaagtt
tttgccaaagaagaagtggtcaaaaacttagatgccactcaactctatttaggtgaaatt
gggttttcaccgctgctcagtgcagaagaagaagtttactttgcgcgtaaagcgttaaaa
ggttgtgaagcctcgcgtaaacggatgatagagagtaatttgagattggtggttaaaatc
gctcgtcgttataataaccgtggtttggcattacttgacctcattgaagaaggtaactta
ggcttgatccgagcggtagaaaaatttgatccagaacgtggatttagattttctacttac
gcaacttggtggatccgccaaaccatcgaacgcgcgatcatgaaccaaactcgtaccatt
cgcttgcctattcatgttgtcaaagagctcaatgtatacctacgtacggcacgtgagttg
acgcaaaagttggatcatgaacctaccgccgaagaaatcgctgaatgtctcgataaaccc
gtcgaagaagtcagtaagatgctccgtctaaatgaaaagatcacttcggttgatacgcct
atcggtggtgaaaatgataaggcattgctcgatattatcgcggatgaaaagggcggtggt
ccagaaacggaagtgcagagcaacgatattaataaacacattgttgattggcttggagag
ttaaatccaaaacagcgagaggtgctcgcgagacgctttggtttgcttggttatgagccg
tctacgcttgaggatgttggtcgcgaaatcgggttgacgagagagcgcgtaagacaaatt
caagttgaggcgttgagacgcttaaaagacattttacaacacgaagggttaagtactgac
agcctattcgaacaacagtaa
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