Pseudoalteromonas piscicida: B1L02_13985
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Entry
B1L02_13985 CDS
T04942
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppis03016
]
B1L02_13985
Enzymes [BR:
ppis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
B1L02_13985
Transfer RNA biogenesis [BR:
ppis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B1L02_13985
Prokaryotic type
B1L02_13985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ASD68006
UniProt:
A0AAD0RGL9
LinkDB
All DBs
Position
1:complement(3007524..3008561)
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AA seq
345 aa
AA seq
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MKTLNYLYGKPLSDGDYKSQPEDFRVEEILDIPFTGEGEHVCLQIVKKGENTAFVAKKLA
EFAQISPRDVSYAGIKDRHGVCTQWFSVPVPIKKSVDFSALNSDSIFVVQQIRHNRKLKT
GCHKGNRFAITLRNVTAPLDILSRINAVRQGVPNYFGEQRFGHDGHNLAMADRLFDGEKI
RDKKLRGLVLSAARSHLFNEVVSRRVAEHGLATTWHREIFLLSGSNAFFDSEIDCELIER
LLNGDILLSAPLVGKGEKGLLPQEREWLAPFAKWHEGLAEFGMKNERRALRLIPEALQVS
MADDSTLTLEFSLPKGTFATALLRELVNHRDASKKFNKHEESIQQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagacactaaattatctttacggcaaaccgttatctgatggcgattataagtcacaa
ccagaagactttagagtcgaagaaattttagatattccttttactggcgaaggtgagcat
gtttgcttgcagatagttaaaaagggagaaaacactgcctttgtcgctaaaaagcttgca
gagtttgcccaaatttcaccgcgagatgtcagctatgcaggaattaaagacagacacggc
gtatgtacgcagtggtttagcgtgccggtgccaattaaaaagtcggtagattttagtgca
ttaaatagtgactctatttttgtggtgcaacaaatacggcacaatcgaaagttaaaaaca
ggttgtcataagggcaatcgctttgccattaccctcagaaacgtgactgctccacttgat
attctgtcgcgtattaatgccgtacgccaaggggttcctaattattttggagaacaacgt
tttggtcatgatggccacaacttagccatggcagataggttatttgacggtgaaaagatc
cgcgataaaaagctcagagggcttgtgctttcagccgctcgctcccatctgttcaacgaa
gtagtcagtcgccgggtggcagagcatggcttggcaacgacttggcatcgtgaaatcttt
ttacttagtggcagtaacgcattttttgattcagagattgattgcgagctcattgagcgg
ttactgaatggcgacattttactttcggcgccattggttggtaagggtgaaaagggctta
ttgccgcaagagcgtgaatggttggcacctttcgctaaatggcacgaaggattagcagag
tttgggatgaaaaatgagcgcagagcgcttagattaatacccgaagcgcttcaggtgagt
atggctgacgatagcacgctaaccctagaattcagtttaccaaaaggaacttttgccacg
gcgctgctcagagagcttgttaatcaccgtgatgccagcaaaaagtttaataaacatgaa
gaatcgatacagcagtga
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