Pseudoalteromonas piscicida: B1L02_14135
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Entry
B1L02_14135 CDS
T04942
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppis03009
]
B1L02_14135 (der)
Ribosome biogenesis [BR:
ppis03009
]
Prokaryotic type
GTPases
B1L02_14135 (der)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
Roc
AAA_22
SRP54
Ras
AAA_24
TniB
SRPRB
NOG1
Ploopntkinase3
RHD3_GTPase
DUF2710
Motif
Other DBs
NCBI-ProteinID:
ASD68034
UniProt:
A0A3B6Y4E4
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All DBs
Position
1:complement(3036107..3037576)
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AA seq
489 aa
AA seq
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MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGYEFIVVDTGGI
DGSEEGIETEMAEQSLLAIEEADIVLFLVDARAGMTVADQAIAQHLRKQQKNCFVVANKT
DGIDADSNCAEFYQLALGDVQQIAAAHGRGVTQLLELTLQPVIAELTAQDEELEHDDEDI
AELYLEGEEAEEGKTGFEDKPVKLAIIGRPNVGKSTLTNRILGEDRVIVYDMPGTTRDSI
YIPMTRNDKEYVLIDTAGVRKRKKVSDVVEKFSVIKTLQAIEDANVVLLVVDAREGISDQ
DLSLLGFALNAGRSLVIAVNKWDGLDDYVKERIKTELDRRLGFVDFARLHFISALHGTGV
GHLFESIDEAYESATKRVSTAMLRRIMDMAQADHQPPLVRGRRVKLKYAHAGGYNPPRIV
IHGNMVHELPDSYKRYLMNYYRKALNVMGTPIKIEFREGDNPYAGRSNKMTLSQKRKLRA
FAKENRNKS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctgtgatcgctctggttgggcgacctaatgtgggtaaatccacactgtttaat
cgtttaacacgtactcgtgacgcgttagttgctgactttccgggtctgactcgcgaccgt
aaatacggccaagcaaactatgaaggctacgagtttattgtggtagacacgggtggtatc
gatggctctgaagaaggcattgaaactgaaatggcggagcagtcgctactggcaattgaa
gaagcggatattgtgctatttttggtggatgcgcgcgcaggtatgacggttgctgatcaa
gctatcgcacagcaccttcgtaaacaacagaagaattgctttgttgtcgccaataaaacg
gatggcattgatgctgattccaactgtgctgagttttatcagctggcgctaggcgacgtt
caacagatcgccgccgcgcatggtcgtggtgttactcaattattagagttgacgctacaa
ccggttatcgctgagctcacggctcaagatgaagaacttgagcatgacgatgaagatatc
gccgagctttaccttgaaggtgaagaagccgaagagggcaaaacgggatttgaagacaaa
cctgttaagcttgcgattattggtcgtccaaatgtaggtaagtcaacactaactaaccgt
attttaggtgaagaccgcgttatcgtttacgatatgccgggtacaacgcgtgattcaatt
tacattccaatgacgcgtaatgataaagagtacgtgctaatcgacaccgcaggtgtacgt
aagcgcaagaaagtcagtgatgttgtagagaaattctcggtaatcaaaacactgcaagcg
attgaagatgcaaacgtggtattgctcgttgtagacgcgcgcgaggggatctctgatcaa
gacttgagtctgcttggttttgcactaaatgcgggtcgctcgttggttattgcggtaaac
aaatgggatggtcttgatgactatgtcaaagagcgtatcaaaactgaactagacagacga
ctgggctttgttgattttgctcgtttgcactttatcagcgcattacatggtacaggcgtt
ggtcacttgtttgagtcgattgacgaagcttatgaatcagcgactaaacgagtaagtacg
gcaatgttacgtcgtatcatggatatggctcaggcggatcaccagccaccactggttcgt
ggacgccgtgtaaagcttaagtacgcacacgcaggtggttataacccgccgcgcattgtt
atccacggcaatatggtgcacgaactgccagatagctataagcgctatttgatgaactac
tatcgtaaagcgcttaatgtaatgggtacgccgattaagattgaattccgcgaaggggac
aacccttacgctggtcgttcaaacaaaatgacgctatcgcaaaagcgtaagcttcgcgca
ttcgcaaaagaaaaccgcaataagtcgtaa
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