Pseudoalteromonas piscicida: B1L02_16010
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Entry
B1L02_16010 CDS
T04942
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppis03021
]
B1L02_16010
Transcription machinery [BR:
ppis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1L02_16010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
EcoRI
SANT_DAMP1_like
DnaB
Motif
Other DBs
NCBI-ProteinID:
ASD68367
UniProt:
A0A0F4NRQ4
LinkDB
All DBs
Position
1:complement(3481970..3482827)
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AA seq
285 aa
AA seq
DB search
MTKDLYALALTGQQSASVEGYLQSVSTIPMLGAEEEKKLATRLQEEGDLNAAKQLIMSHL
RFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEYVL
KNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQDEVTTVANELGVSEKEVREMESRMAGQ
DMGFDLSADDDESQAGNFSPVQYLTDTSSDLAEEVEQEQWQEQSHNRLFAALKTLDERSQ
DIVSARWLADEKATLQDLAEKYSVSAERVRQLEKSAMKKLQNAMS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagatttatacgcattagcactaactgggcagcagagcgcaagtgttgaaggt
taccttcaatctgtaagcacaatacctatgcttggcgctgaggaagagaaaaaacttgcg
acacgtcttcaggaagaaggggatcttaacgcggctaagcaactcattatgtctcatttg
agatttgttgctcacatcgcaaaaagttattcgggctatggcctacctcaggctgactta
atccaagaaggtaatattggattgatgaaagcagtaaagcgttttgacccaagcgtgggt
gtgcgtctcgtatcttttgcggtacattggattaaagcagaaatccatgaatatgtatta
aagaactggcgtattgttaaagttgcgacgacaaaagcgcagcgtaaattattcttcaat
ctgcgcaaaaataaaaagcgtttaggttggtttaaccaagacgaagtgacaacggttgca
aacgagcttggtgtaagtgagaaagaagttcgcgagatggagtctcgtatggcaggccaa
gatatgggctttgacctatctgctgatgatgacgaaagccaagcgggtaacttctctcca
gtacagtatttaacagacacaagtagcgaccttgccgaagaagttgagcaagagcagtgg
caagagcagtcacataatcgcctatttgcagcattgaaaacgcttgatgagcgctctcaa
gatatcgtaagcgcacgttggcttgctgacgaaaaggcaacactacaagatcttgctgag
aaatatagcgtgtcggcagagcgtgtacgccagctagagaagtcagcgatgaaaaagctg
caaaacgcaatgagctaa
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