Pseudoalteromonas piscicida: B1L02_16540
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Entry
B1L02_16540 CDS
T04942
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ppis
Pseudoalteromonas piscicida
Pathway
ppis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B1L02_16540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppis03021
]
B1L02_16540
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_16540
Enzymes [BR:
ppis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B1L02_16540
Transcription machinery [BR:
ppis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B1L02_16540
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B1L02_16540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF3966
GST_N_3
Motif
Other DBs
NCBI-ProteinID:
ASD68465
UniProt:
A0A0F4NX76
LinkDB
All DBs
Position
1:complement(3595813..3596088)
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVEDAVDKIGNRFDLILVAARRARQISVGGKDPMVDAENDKPTVIALREIEQGFVT
TDSLDIIDREEQQHQEAAELAAVAAIVGGNR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaactgtagaagatgcagtagataaaattggtaaccgctttgacttgatt
ttagtagcagcgcgtcgcgctcgccaaatttctgtaggcggtaaagatcctatggttgat
gctgaaaacgacaagccaaccgtaatcgcgctacgtgaaattgagcaaggttttgtaacc
actgactcgcttgatattatcgaccgtgaagagcagcaacaccaagaagctgcagagctt
gcggcagtagctgcaatcgttggtggcaatcgctaa
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