Pseudoalteromonas piscicida: B1L02_18900
Help
Entry
B1L02_18900 CDS
T04942
Name
(GenBank) transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppis
Pseudoalteromonas piscicida
Pathway
ppis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1L02_18900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppis03000
]
B1L02_18900
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_18900
Enzymes [BR:
ppis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
B1L02_18900
Transcription factors [BR:
ppis03000
]
Prokaryotic type
Helix-turn-helix
AraC family
B1L02_18900
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B1L02_18900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HTH_3
HhH-GPD
Fer4_9
HTH_23
DMAP1_like
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ASD68998
UniProt:
A0AAD0RMS2
LinkDB
All DBs
Position
2:81799..83157
Genome browser
AA seq
452 aa
AA seq
DB search
MYTPEVCSQARNSRDARFDGLFFVAVKSTGIYCRPICPAPAAKEKNVEYFQFAHNAAQAG
FRPCIRCRPDSAPGSYAWLGTETTAVRAKKLIDEGALIRHSTEDLADRLGISVRYLNKVF
NQYFGTSPKQYALYKQCDLAKQLLQQSDLAVTEVAFAAGFNSLRRFNDAFQKLYQLSPSQ
LRKDAGSGSAIAIYLSYRPPYNWDKMQQFLAMRIVPSIEWLSEHSYGRTVMIQGEKGRFT
ATIEPEKHRFKVDIALSDLSLLVPMIAQIRRVLDLDADTGFIESHLHEAAPDLPLQEGLR
LPGIWSEFEAGMRAILGQQISVQAARNLLALLVETHGEVADDGMRYFPKPQAVFDSDLAF
FKMPQRRKAAINAFAAQYVDSEHVELDNWLKIKGIGPWTVDYAKMRGLSHPDIYLGGDLG
VKKAMEKSLKTIDLEKCAPFRSYLTFQLWQQL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaccagaggtttgttctcaagctagaaatagtcgcgacgctagatttgatggg
ttgttttttgttgcggtaaagagcacaggcatttattgtcggccaatatgtccagcacct
gctgcaaaagaaaagaatgttgagtattttcaatttgcccacaatgctgcgcaagcaggc
tttagaccttgtattcgctgccgccccgacagcgcgcctggtagttatgcatggcttggc
acggaaacaactgcagtcagagccaaaaagttaatcgatgaaggtgccttaatacgtcat
tcgacagaagatttagccgatagattaggcatttcggtccgatacttaaataaagtattc
aatcaatattttggcacgagccccaaacaatatgcactttataagcaatgtgacttagct
aagcagttattacagcaaagcgaccttgcagtgacggaagtcgcgtttgccgctgggttt
aactcattgcgacgttttaatgatgcattccaaaaactatatcagttatcaccaagtcag
cttagaaaagacgcgggaagtggctctgcaatcgcgatttacttgtcctatcgaccaccg
tacaactgggacaaaatgcagcagtttttggcgatgagaattgtaccaagtatagagtgg
ttatcagaacacagttatgggcgaacagtgatgatacaaggtgaaaaagggcgtttcacc
gcgactatcgagcctgaaaaacatcgctttaaagtggatatcgcgctatctgatctatcc
ttgttagttcctatgattgcacagatcagacgcgtgttagacttagatgcagacacgggc
tttattgagtcccaccttcatgaagcagcgcccgacttgccgctacaagaggggctcaga
ttacccgggatctggagcgaatttgaagcgggaatgagagctattttgggtcaacaaatt
agtgttcaagcggcgagaaacttacttgctttattggtcgaaactcatggtgaagtagct
gatgatggtatgcgttacttccccaaacctcaggccgtatttgatagtgatcttgccttt
tttaaaatgccacagcgacgaaaggccgctattaacgctttcgctgcgcaatatgtggat
tcggaacatgttgaacttgataactggttaaaaattaaaggtataggaccttggactgtc
gactatgcgaaaatgcgtggattgagtcacccagacatttacttgggtggtgacctgggt
gtgaaaaaagcaatggaaaaatccttaaaaacaatagatctcgaaaaatgtgcccctttt
cgttcttatttaacatttcaactatggcaacaattatga
DBGET
integrated database retrieval system
