Pseudoalteromonas piscicida: B1L02_19360
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Entry
B1L02_19360 CDS
T04942
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppis03009
]
B1L02_19360
Ribosome biogenesis [BR:
ppis03009
]
Prokaryotic type
ribosomal protein modification factors
B1L02_19360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
ASD69078
UniProt:
A0AAD0RME3
LinkDB
All DBs
Position
2:180793..182973
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AA seq
726 aa
AA seq
DB search
MEIKVNYLDNLRIDAKFDDFSVIADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCN
ARDIPTDGIRVAQNNIVDPENRYNQIFKIQVELPESISEKDRQGILRSIDRCTVKKVIQT
GPEFQVEAVESLEDDSQAMLMVDTSESDSTFILGKDLPLEQTIANMTKILSDLGMKIEVA
SWRNIVPHVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGEE
IANAEFVHYPNEKWFKPEADDALPTEILDDYTREIYDPEGELRGSHLIDTNSGNVARGIC
SIPYTRHSDGETVYFPSNLIENLFLSNGMSAGNNLFEAKVQCLSEIFERAVKKQIIEQEI
VLPDVPESVLAKYPGIVEGIKGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSAKHDYDFVEWDFTGTNEEECDKLFGILEALGKEAYIAEFTDLGIACRILVPGFSEVYP
AEDLIWDNTNKALQYREDILNIHSLDDEALANLVERLEDSQLDNYIDIITLIGVEFDENT
VWGQLTILELKILIYLALGDIEAAIELVETFLQFNDNTVERGLFYQAMHATLEIALDEEL
EIEDYIHNFTRMFSKDVMDAVIGSINGDVKFYGLTPTNMKLEGLDKHLRLIESYKKLHSA
RGKFAL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtaaattacctcgacaatctcagaattgatgccaaatttgacgacttt
tctgtcattgcggatcagccaattcgctataaaggcgatggctcagcaccaagtccattt
gactactttttagcttcttcagcgctttgtgctgcttactttgtgaaggtgtattgtaat
gcgcgtgatattccaacggatggaatccgtgtggcgcaaaacaacatcgttgatcctgaa
aaccgttataaccagatttttaaaattcaggtggagctaccagaaagcatttctgaaaaa
gaccgccaaggtatcttgcgttcaattgaccgctgtaccgttaaaaaggtgatccaaacg
ggacctgaattccaagtggaagcggttgaaagccttgaagatgactctcaggcgatgctg
atggttgataccagcgaaagcgacagcacttttatcctaggtaaagatcttccgcttgaa
caaactatcgcaaatatgactaagatcctttcggatttaggcatgaagattgaagtcgcg
tcatggcgtaatatcgtgccacacgtctggtctttgcatattcgtgatgccgcttcacca
atgtgtttcaccaatggtaaaggggcaacgaaagaaagcgcgctttgctcagcacttggt
gagtttattgaacgtttaaactgcaacttcttttataatgatcaattctttggtgaagaa
attgcaaatgctgaatttgttcactacccgaacgaaaagtggtttaagcctgaagctgat
gatgcgcttcctaccgaaattttagacgactacactcgtgaaatttacgacccagaaggt
gaactacgtggctctcacttaatcgacacgaattcaggtaatgtagcgcgcggtatttgt
tctattccgtatactcgccattcagatggtgaaacggtgtattttccgtcaaacctaata
gaaaacttattcctaagtaacggtatgagtgctggtaataacttgtttgaagcgaaagtg
cagtgcttatctgagatctttgaacgtgcggtgaaaaaacaaatcatcgaacaagaaatt
gtgttgcctgatgtacctgagtctgtactggctaaatatccaggtattgttgaagggatc
aaagggcttgaagaacaggggttccctgttgtggtgaaagatgcctctctaggcggtcaa
tttcctgtgatgtgtgtgacgttgatgaaccctaaaacgggcggtgtatttgcgtctttt
ggtgcgcacccaagttttgaagtggcacttgagcgtagtttgactgagctgttacaaggt
cgcagttttgaaggcttaaatgatgtaccaaaacctacgtttaacagcatggccgtatct
gagccggagaactttgttgaacactttatcgattcaacgggtgtgatctcatggcgtttc
tttagtgcgaagcatgactacgactttgttgagtgggatttcacaggcacgaatgaagaa
gagtgcgataagttatttggcattctagaggcgttaggtaaagaagcctatattgccgaa
tttacagacttagggatcgcttgtcgtattttggtaccgggtttttctgaagtctatcca
gctgaagatctgatttgggacaacaccaataaagcactgcaatatcgcgaagatattctc
aacatccattctctagatgacgaagcattagctaacttggttgagcgtttagaagacagc
cagcttgataattatatcgatattatcaccctaattggcgttgagtttgacgaaaatacg
gtgtggggtcagcttacaattcttgagcttaagattttaatctatctagcgcttggcgat
atcgaagcggccattgaactagttgaaaccttcttgcagtttaatgacaacactgtagag
cgtggcttattctaccaagcaatgcacgccacacttgaaattgcattggatgaagaacta
gaaattgaagattacattcataactttactcgtatgttctcaaaagacgtgatggatgcg
gttattggttcaattaatggtgatgtgaaattctatggcttaactccgacaaacatgaag
ttggaaggcttagataagcacctccgtcttattgaaagttataagaagctacatagtgca
agaggcaaattcgctttgtaa
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