Pseudoalteromonas piscicida: B1L02_20165
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Entry
B1L02_20165 CDS
T04942
Name
(GenBank) 23S rRNA pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppis03009
]
B1L02_20165
Enzymes [BR:
ppis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
B1L02_20165
Ribosome biogenesis [BR:
ppis03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B1L02_20165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RNA-dir_pol_phytoreovirus
Motif
Other DBs
NCBI-ProteinID:
ASD69215
UniProt:
A0AAD0RL09
LinkDB
All DBs
Position
2:369797..370783
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AA seq
328 aa
AA seq
DB search
MTEQKRLNKYISETGYCSRREADDLIASGRVKVNGILPEMGTKVSDADTIVIDGKPLKAK
PRAVFIAYNKPVGVTCTTERKIKSNIVSAINYPERIFPIGRLDRPSEGLIFLTNQGDMVN
KILRAGNNHEKEYEVVVNRPIDERFVKRMSAGVPILGTVTKPCKVRKTGAKSFTIVLTQG
LNRQIRRMCEYLGFEVTHLKRIRIMNIDLKGLSSGKWRHLNDDEMRAINLATESSSKTQE
ASAGAGAGKLQDKPRSEVGEVSRPKQDGRAHNRKDRTTELDKQNSVKPKSKTRSGEQNHG
NNNRKSSLKPNAKPAKRVKGTLSLNKSK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgacagagcaaaagcgcctcaataaatacatcagtgaaactggatactgcagtcgtcgt
gaagctgatgacttaatcgcctcaggccgtgtcaaagtaaatggaattctaccagaaatg
ggcaccaaagtgtcagatgctgataccatcgttattgatggtaagcctctgaaagctaag
ccaagggctgtatttattgcttataataaacctgttggtgtaacttgtaccactgaacgt
aaaatcaaaagtaatattgttagtgcgattaattaccccgaacgtattttccccattggt
cgcctagaccgcccatctgaaggattaattttcctgaccaaccaaggcgatatggtcaat
aagatccttcgcgccggtaataaccatgaaaaagaatatgaggttgtggtcaatagaccc
attgatgagcgatttgtaaaacgtatgtccgcaggtgttccaatccttggaactgtgact
aaaccatgtaaagttcgtaaaaccggtgctaagtcatttaccattgtcttgacccaaggc
ttaaatcgtcaaattcgcagaatgtgtgaatatctaggttttgaagtaacacaccttaag
cgtattcggatcatgaatatcgacctaaaggggcttagttctggcaagtggcgtcatctc
aatgacgacgaaatgcgagcgattaatttagccactgagtcatcaagtaaaacgcaagaa
gcatcagcaggtgcaggcgcaggaaagctacaagataagcctagaagtgaagtaggcgag
gttagtcgcccaaagcaagatgggcgagcgcataacagaaaggatcgaacaactgaactc
gacaagcaaaatagcgttaagccaaagtcaaaaacgcgaagtggtgaacaaaatcacggt
aacaacaatcgcaaatcaagccttaaaccaaatgctaagccagcaaaaagagtcaagggt
actttgtccttgaataaaagcaagtaa
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