Pseudoalteromonas piscicida: B1L02_20910
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Entry
B1L02_20910 CDS
T04942
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppis03032
]
B1L02_20910
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_20910
Enzymes [BR:
ppis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B1L02_20910
DNA replication proteins [BR:
ppis03032
]
Prokaryotic type
DNA Topoisomerases
B1L02_20910
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B1L02_20910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
ThiI_fer
Motif
Other DBs
NCBI-ProteinID:
ASD69355
LinkDB
All DBs
Position
2:complement(553671..554750)
Genome browser
AA seq
359 aa
AA seq
DB search
MQRPVTGDNVDCKDIQSEFHECNRLEIARKKWGRGFCYLDASNNPIRSKMFKRRIKQLVI
PPMWDQVQISACAFDKVQAVGFDGKGKKQYIYHPSYQLTQQQAKFTRMRQFAKQLPQARA
RCIEQLENDDWNQEKVAALAIMVLDSTGIRIGNQHYYQHNDTCGLTTLRRKHLKYNEAGI
AFEFQGKHGKQRKVNVFDEQLCQFISESAVQTGYGLFRYHYHGRWLDLTSDDVNTFIHRL
HGPEFTSKDYRTWVASRLAVRFAFDVAAEITTNNRKRFDTSLIKQVAKALGNTPKVCRDY
YIHPTLLSHLCELSQTQTLPDFSRDFWQLDGSLSDCEAFIVKVLTEEKGEEGTPPPLGT
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaccagtcactggagataatgtggactgcaaggatattcaatctgagtttcac
gaatgcaatcgtttagagattgcgagaaaaaagtggggccgtggtttttgctacttagat
gcaagcaacaaccctatccgctccaaaatgttcaagagacggataaaacagttggtgatc
ccgccaatgtgggatcaagttcagatcagtgcctgcgcttttgacaaagtgcaggccgtt
ggtttcgatggcaaaggtaaaaagcagtatatttatcatccgagctatcagctcacccag
caacaagctaaatttacccgtatgaggcaatttgcaaaacagctaccacaagcaagagcg
cgctgcatagagcaactagaaaacgatgactggaaccaagaaaaagtcgccgcacttgct
attatggtgctcgactccacggggatccgcattggtaatcaacattattatcagcacaat
gacacttgtggcctaacaacattaaggcgaaagcatctaaaatataacgaagctgggata
gcttttgagtttcaaggaaagcacggtaagcaaagaaaagtgaacgtattcgacgagcag
ctttgccaatttattagtgagtctgcagtacaaaccggctatgggttatttcgttatcac
tatcatgggcgttggctcgatttaaccagtgatgacgtcaacacgtttatccaccgcctg
cacggcccagaatttaccagcaaggattaccgcacttgggtagcttctcggttagcggta
cggttcgcatttgacgttgcagcagaaataacaactaacaacagaaagcgtttcgatacc
agcttaattaaacaggtagccaaggcgcttggcaacacccccaaggtctgtcgagactac
tacatccaccccacgctcctgagtcacttatgtgaacttagccaaactcagacgcttccc
gattttagtagagacttttggcagttagatggctcgctaagcgattgtgaagcattcatc
gtcaaggtattaacagaagaaaagggggaggaaggaacgcctccccctttgggcacttag
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