Pseudoalteromonas piscicida: B1L02_20980
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Entry
B1L02_20980 CDS
T04942
Name
(GenBank) GGDEF domain-containing protein
Organism
ppis
Pseudoalteromonas piscicida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
DAHL
PAS_4
PAS_3
PAS_8
PAS_13
Motif
Other DBs
NCBI-ProteinID:
ASD69368
UniProt:
A0AAD0RJX7
LinkDB
All DBs
Position
2:567325..570486
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AA seq
1053 aa
AA seq
DB search
MKNKAFIGVQALLLCAPIALFAYFYSQQELSSQTHQARVTLLFEAKSIDAKLDAAVLQML
SAQLNQYDQLAQLAHAIDALNTPQRDALFAEATPDIRQQFDAYRQLLSNKVLQVESIKTA
AANIKNSLLYLPELLIELEQSDPELATHANRMLANLMLGQLYEFVAEPLLTAGSKSNLEQ
LIYQHFNVALANSAELKKAKQRFLSLPSDQAFSALYAAYSQHHSETIEKTKHQSELLLLL
TIVLFLLLIVFANRLYVAKNKILSTSQTLSDAVARLTEGFALFSRSGNLLLCNSAWRNHF
AIADSEKMPRKLEEWQQQFGDIFNSDANLHQTESGAWLQVKQTNTHNNGQVFVSVNVSLF
KQAEEELRKWGHAIEQSPSSIVITDPRARIEYVNPKFEQVTGYSLENVKGQTPKVLGSKQ
GFTDYKALWQTIKQGKVWRGEFYNRRKSGDYYWEYASISPIKNQQGEIINFIAIKEDITA
QKSASAQLKTAAAVFNATQEGIMTTNAKLEITAVNPAFTKITGYEEHEVLGQRPNILSSG
KHDKHFYEQMWSTLNSYGQWASEIWNKRKDGTLYPEWLAISVVHDDKGLVQQYVAILSDM
TERKAQEEQIEYQAYYDVLTGLPNRTLLLERIEQDIRRMSRTHHQSAVLFIDLDRFKRVN
DTMGHEAGDALLISVAKRLNGLLRKSDTLSRFGGDEFVLLLSQIAHPDHAAQVADKIVKA
LSEPFVINGFEVFTGASIGIAILPSDAKDQKELLRLADLAMYKAKESGRNQYHFFAQEMQ
QQVNRRVELEQLLRAALEHQRLTVHYQPIVDTVSGKLYGVEALMRWPTDFGQYISPAEFI
PVAEESGLIAPLGEWLLAKACNDIRRLNKALGMNCYLTVNVSSQQYRLGFNATTIKQIMQ
QSGFHPENLTLEITESILLEDDKAVTAWLQSLRATGVNLAIDDFGTGYSSLSYLKRFPIN
ILKIDRGFIQDIDQNQDAAVLVNAILSMAESLSLKVVAEGVEQQGQLDCLKGLGCQYVQG
YFYAKPMAIEGLIDWVEQFAIASERASSKLWLD
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaggccttcattggtgtgcaagcgttactgctatgcgcgccaattgcgctt
tttgcgtatttttactcgcagcaagagctcagcagtcaaacacaccaagcacgagttacc
ctgctctttgaagccaaaagtattgatgccaaactggatgccgctgtgttacaaatgctt
agcgcacagctcaatcaatatgatcagttagcgcaattagcacatgcaattgacgctttg
aatacaccacagcgagacgcgttatttgcagaagccacgcccgacattcgacagcaattt
gatgcctatcgtcagctacttagcaataaagtattgcaagtcgaatccattaaaactgcg
gcggcaaatattaaaaatagcctgctttatctccccgagttgctaatcgagctagaacag
agcgatcctgaattggcaacgcacgccaatagaatgcttgctaatttaatgttgggtcag
ctttacgaatttgtcgcagagcctttactcacggctggctcaaaaagtaacttagagcag
cttatctatcagcattttaatgttgcccttgctaacagtgcagagttaaaaaaggcaaaa
caacgctttttgtctttgcctagtgaccaagctttttcagcactttacgcggcatatagc
cagcaccacagtgaaaccatagaaaaaaccaagcatcaaagtgaattactcttactgctg
accattgtgctatttttgctcttgattgtgtttgcaaaccggctttacgtggccaaaaat
aaaattctgagcactagccaaactttgtccgatgccgttgcgcgtttaaccgaaggcttt
gctctttttagtcgcagcggcaatttgctgctctgtaacagtgcgtggcgtaatcatttc
gcaattgctgatagcgaaaaaatgccacgcaagctagaagagtggcagcagcagtttgga
gatatttttaactccgatgccaatttgcatcaaaccgaatctggcgcttggttacaggta
aaacaaacgaacacgcacaacaatggtcaagtgtttgtgagtgttaatgtctcccttttt
aaacaagcggaagaagagcttcgcaagtggggccatgccattgagcaaagcccctcctcc
attgtgataaccgatcctcgtgctcgcattgaatacgtcaaccctaagtttgaacaagtt
actgggtattcacttgagaatgtgaaaggacaaacacccaaagtactaggctccaaacaa
gggtttaccgactacaaagcgctgtggcaaaccattaaacaaggcaaagtctggcgtggt
gagttttacaatcgccgtaagtctggagattactattgggagtacgcgtctatttccccg
attaaaaaccagcaaggggaaatcattaactttattgcgatcaaagaagacatcaccgca
caaaaaagcgcaagtgcgcagcttaaaaccgcggcggcggtatttaatgcaacgcaagaa
gggatcatgaccaccaacgcaaaacttgagatcaccgcggtcaatcctgctttcaccaaa
attactggatacgaagaacatgaagtgcttggtcaacgacctaatattttaagttcgggt
aagcatgacaaacatttttatgagcagatgtggagcacacttaactcatatgggcaatgg
gcaagtgagatctggaacaagcgcaaagatggtaccttatatccagaatggttagcgata
agtgtcgtgcatgatgataaagggctagtacagcaatacgttgccattttgtcggatatg
actgagcgcaaagcgcaagaagagcagattgaatatcaagcctattacgatgtgttgacc
ggactgcccaatagaacgttattacttgagcgtattgagcaagatattagacgcatgagc
cgtacgcatcatcaaagcgcggtattatttatcgatttagacagatttaagcgtgtcaat
gacactatgggtcacgaagctggagatgcgttacttatctccgttgctaagcgcttaaac
ggcctgttgcgtaaaagcgataccttgagccgctttgggggagatgaatttgtattatta
ttgagtcaaattgctcatccggatcatgctgctcaagtggccgataaaattgtcaaagca
ctgagcgaaccatttgtgataaacggctttgaggtatttacgggggcgagtatcgggatc
gcgattttaccaagtgacgcaaaagatcaaaaagagttattacgacttgccgacttagct
atgtataaagcaaaagagtcgggacgcaatcaatatcatttctttgcgcaagaaatgcag
caacaggtgaatcgtcgagttgagctggagcagctgctgcgagctgcgcttgaacatcag
cgcttaaccgtacattaccaacctattgtcgatacggtgtcgggtaaattatatggcgtc
gaggcgctcatgcgctggccaactgatttcggccagtatatctcacctgctgaatttatt
ccggtcgctgaagaaagcggccttattgctcctcttggtgagtggttacttgccaaggca
tgtaatgatattcgcaggttaaataaagcgcttggtatgaactgttatttgacggtaaat
gtctcgagtcagcagtatcgacttggatttaacgccactaccattaaacaaatcatgcag
caatcaggctttcatccagaaaatctaacgcttgaaatcacagaaagcatcttacttgaa
gatgataaagccgtaaccgcttggctgcaaagcttacgggcaacgggagtaaacctagca
atcgacgactttggcactggctactcttcgcttagctaccttaaacgcttccccatcaat
atattaaagatagaccgaggctttattcaagatatagatcaaaaccaagatgcggctgtt
ttggtcaacgcgattttgtcgatggcggagagtttatcgctcaaagtggtagcagaaggc
gtagaacagcaaggacaactagattgcttaaaaggcttgggctgtcagtatgtgcaagga
tacttttatgccaaaccaatggcgattgagggattaatcgattgggttgagcaatttgcc
attgcatcagagcgagcatcttctaagctctggttggattga
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