Pseudoalteromonas piscicida: B1L02_21090
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Entry
B1L02_21090 CDS
T04942
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_21090
DNA repair and recombination proteins [BR:
ppis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1L02_21090
Archaeal homologous recombinant proteins
B1L02_21090
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
ASD69389
UniProt:
A0AAD0W638
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All DBs
Position
2:587487..588686
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AA seq
399 aa
AA seq
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MKVLHTSDWHLGQSFYEHDRSEEHQLFLDWLCDALVEQKIDVLLISGDIFHTATPPASAE
KQLYTFIQKASQLCPQLHIILIAGNHDSANRIETAKPLLTLFNTHVIGRFNKQAPEHVVI
DLPVKAQHMHVVAMPFLRSADLPKPLDDEFDYQAGVQLAYQHALSTIEEVKGPIVLMGHL
HAKGGTISEDSERNLNIGGFDAVSAGVFGEQFDYVALGHLHKAQTVAKQSAIRYCGTPLP
MSFSERNYKHQVLLVEFNEQGLVDVNPLYVPRFKDVLYIPEDGAKRLTELCEAIAAQDFS
KFDSAPYIRLKLSAAETNSRFRAEIDEALKGKDIKFCGIERVSKGVEASELLLEDLGKVE
SLSPNTLLDIAYREIEPEQEKAPAALHEKLAEVIASMEE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttacatacgtctgactggcacttagggcaatcgttttacgaacatgatcgc
agtgaagagcatcagctatttttagactggctatgtgatgcgttggttgaacagaaaatc
gatgtactgttgatcagcggtgatatttttcataccgcaacaccgcccgcgagtgctgaa
aaacaactgtatacctttatccaaaaagcatctcaattgtgccctcagctgcacattatt
ctgattgctggcaaccacgattccgctaatcgcattgaaaccgcaaagccactcttaacc
ctattcaacacccatgttattggtcgctttaacaagcaagcgcctgaacacgttgttatc
gatttgcccgtcaaagcgcagcatatgcatgttgtggcaatgccatttttgcgcagtgcc
gatttaccaaaaccgctagatgacgagtttgactatcaagcaggggtgcaattagcttat
cagcatgcgctgagtacgatagaagaagtgaaaggccctattgtgctaatggggcatctg
cacgccaaggggggaacgatttctgaagattctgagcgtaacctcaatattggcggtttt
gatgcagtatctgcaggcgtgtttggcgaacagtttgactatgttgcgctaggtcattta
cataaagcgcaaactgtagctaagcagagtgctatcagatactgcggcacacctttgccg
atgtcattttccgaacgcaattataaacatcaggtattgctcgttgaatttaatgaacaa
ggtcttgtcgatgtaaaccccctttacgttcctcgcttcaaagatgtgctatatatccct
gaagatggcgcaaagcgcttgactgaattatgcgaagctatcgcggcgcaggattttagc
aagttcgatagcgctccctatattcgcttaaaactatccgcagcagagactaatagccgc
tttcgtgctgagattgatgaagcgctaaaaggaaaggatattaagttttgtggtatcgag
cgggtgtctaaaggcgtagaagcaagcgagctgttgcttgaagatttgggtaaggtcgaa
tcgttatcgcccaacaccttgttggatattgcttatcgcgagattgaacctgagcaggaa
aaggcaccagcggcattgcatgaaaagttagcggaagtgatcgcgagcatggaggaatag
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