Pseudoalteromonas piscicida: B1L02_21425
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Entry
B1L02_21425 CDS
T04942
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppis03000
]
B1L02_21425
Transcription factors [BR:
ppis03000
]
Prokaryotic type
Helix-turn-helix
Other families
B1L02_21425
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ASD69445
LinkDB
All DBs
Position
2:667333..668205
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AA seq
290 aa
AA seq
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MDIISKIKEGLGHFSPAEEKVARLILAELNFAASASISELAEKAQVSHASITRLARSLGC
TNVRDLKFQLTQSAAIGERFTNPEPIEKEKISHVYTSIQEILTLNAGLIDEAVVEQASEV
ICATRHCLIFGVGGGSSLMAQECQNRLFRLDVLSNAHSDPMMMRMVAATVNKGDVVICLS
LSGVSPDVKAAALIGKEYGAEVIAICPVSDLADIADHHLPIKTQESDYIFKPSAARYAMM
AAVDILSSEVAIRNQKRSREKLRRLKTQLDQHRDKNSNMPPADKRFPLGD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggacattattagcaaaattaaggaaggtttggggcactttagcccagcggaagaaaaa
gtcgctcggcttattttggctgagcttaactttgccgcaagcgcatctattagcgagtta
gctgaaaaagcacaggtcagtcacgccagcattacgcggttagcgcgtagcttaggctgc
accaatgtgcgcgaccttaagttccagctgacacaatcagccgcaattggtgagcgtttt
acaaatcctgagccaattgaaaaagagaagatttctcatgtttatacctctattcaggag
atcctcacgctcaatgcgggactcatcgatgaagcggtggtggagcaggcgagtgaagtg
atttgcgccacgcgtcattgcttaatttttggggttggtggtggtagcagcctgatggca
caagaatgccaaaatcgcttatttcgcttggacgtacttagtaatgctcactccgatccc
atgatgatgcgcatggttgccgcaacggtgaataaaggggatgtggtgatttgtctctcg
cttagtggtgtttctcctgatgtgaaagcggcggcgcttatcggcaaagagtatggtgca
gaggttattgctatttgcccagtgagtgacttggcggacatcgccgatcatcatttgccc
atcaaaactcaagaaagtgattacatatttaagcccagcgctgcacgctatgccatgatg
gcagcggtggacattttgtcgagcgaggttgccatccgtaatcaaaagcgctcaagagaa
aaactcagacgtcttaaaacccagttagatcagcatcgagataaaaacagtaatatgcca
cctgccgataaacgctttccgctgggggattaa
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