Pseudomonas plecoglossicida: RK21_00031
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Entry
RK21_00031 CDS
T03646
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00362
Benzoate degradation
ppj00624
Polycyclic aromatic hydrocarbon degradation
ppj01100
Metabolic pathways
ppj01120
Microbial metabolism in diverse environments
ppj01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RK21_00031
00624 Polycyclic aromatic hydrocarbon degradation
RK21_00031
Enzymes [BR:
ppj01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RK21_00031
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
GAD-like
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AJG11539
UniProt:
A0A0B5JZF3
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All DBs
Position
35814..36533
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AA seq
239 aa
AA seq
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MPAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPDFSHLGFGAH
DHDLLLNFNNGGLPIGERIIVAGRIVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRCLTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFAISGPSIATKLITQLY
FEGDPLIPMCPIVKSIANPQAVQQLIAKLDMSNANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccaggacaacagccgcttcgtgatccgtgatcgcaactggcacccgaaagct
cttacgcctgactacaagacgtccattgcccgttcgccacgccaggcactggtcagcatc
ccgcagtcgatcagcgaaaccaccggcccggacttttcccacctgggcttcggcgcccat
gaccatgacctgctgctgaacttcaacaacggcggcttgccgatcggcgagcgcatcatc
gttgccggccgtatcgtcgaccagtacggcaagcctgtgccgaacaccctggtggaaatg
tggcaagccaacgccggcggccgctaccgtcacaagaacgaccgctacctggcgccgctg
gacccgaacttcggtggcgtcggccgctgcctgaccgaccgtgatggctactacagcttc
cgcaccatcaagccgggcccgtacccatggcgcaacggcccgaacgactggcgcccggcg
cacatccacttcgccatcagcggcccgtcgatcgccaccaagctgattacccagctgtac
ttcgagggtgacccgctgatcccgatgtgcccgatcgtcaagtcgatcgccaacccgcaa
gccgtgcagcagttgatcgccaagctcgacatgagcaacgccaacccgatggactgcctg
gcctaccgcttcgacatcgtgctgcgcggccagcgcaagacccacttcgaaaactgctga
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