Pseudomonas plecoglossicida: RK21_00165
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Entry
RK21_00165 CDS
T03646
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00470
D-Amino acid metabolism
ppj00550
Peptidoglycan biosynthesis
ppj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RK21_00165
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RK21_00165
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
RK21_00165
Enzymes [BR:
ppj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RK21_00165
Peptidoglycan biosynthesis and degradation proteins [BR:
ppj01011
]
Precursor biosynthesis
Amino acid ligase
RK21_00165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AJG11673
LinkDB
All DBs
Position
169145..170485
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AA seq
446 aa
AA seq
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MIASDQFRIVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELDTLRRDYPQVEVRCGEL
DVDFLCRANELYVSPGLALATPALQQAAARGVKLSGDIELFARHAKAPIIAISGSNAKST
VTTLVGEMAAKAGKRVAVGGNLGTPALDLLADDVELYVLELSSFQLETTDQLNAEVATVL
NISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRPCWTFGLNQPDFK
AFGLREVDGEKYLAFEFQALMPARELKIRGAHNQSNALAALALGHAAGLPFEPMLEALRE
FGGLAHRCQWVRERNGVNWYDDSKATNVGAALAAIEGLGSDIEGKLVLIAGGDGKGADFA
ALREPVKRFCRAVVLLGRDAERLAEALGDGVQLVRVKSLDEAVKQCAELSRAGDAVLLSP
ACASLDMFKNFEERGRLFAQAAGGLA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgcttccgaccaattccgcatcgttgtcggcctcggcaagagcggcatgtccctg
gttcgcttcctggcgagccggggcattgcctttgcggtcgccgacacccgcgagcaaccg
ccggaactggacaccctgcgccgtgattacccgcaggtggaagtgcgctgtggtgaactg
gacgtggacttcctgtgccgcgccaacgagctgtacgtcagccccggcctggcccttgcc
accccggccttgcagcaggcggccgcgcgtggggtgaagctgtccggtgacatcgaactg
ttcgcccgccacgccaaggctccgatcattgccatcagcggctccaacgccaagagcacc
gtcactaccctggtcggcgaaatggccgccaaggcgggcaagcgcgtggcggtgggcggc
aacctcggtaccccggcgctggacctgctggccgatgacgtcgagctgtacgtgctggaa
ctgtccagcttccagctggaaaccaccgaccagctcaacgccgaagtggccaccgtgctg
aacatcagcgaagaccacatggaccgctacagcggcctgccggcctaccacctggccaag
caccggatcttccgtggtgcccgtcaggtcgtggtcaaccgccaggacgccctgagccga
ccgctgccggtggaaggccgcccatgctggaccttcggtctcaaccaaccggatttcaag
gccttcggcctgcgtgaagtggacggcgaaaaatacctggcgttcgagttccaggcgctg
atgccggcacgtgagctgaagattcgtggcgcccacaatcagagcaacgccctggcggct
ctggctctggggcacgctgccggcctgccgttcgaaccaatgctcgaggcactgcgcgag
ttcggcggcctggcccaccgttgccagtgggtgcgcgagcgcaacggcgtgaactggtac
gacgattccaaggccaccaacgtcggtgctgccctggccgcgatcgaaggcctgggttcc
gacatcgaaggcaaactggtgctgatcgccggtggcgacggcaagggcgccgacttcgcc
gcgttgcgcgagccggtcaagcgcttctgccgcgccgtggtgctgcttggccgtgatgcc
gagcgcctggccgaagccctgggtgatggcgtgcaactggtccgcgttaagtctcttgac
gaggctgtaaagcaatgcgccgaactgtcccgggcgggtgatgccgtgctgctgtcgccg
gcgtgcgccagcctcgacatgttcaagaacttcgaagagcgcgggcgcctgttcgcccag
gcagcgggaggccttgcatga
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