Pseudomonas plecoglossicida: RK21_00229
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Entry
RK21_00229 CDS
T03646
Name
(GenBank) tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00020
Citrate cycle (TCA cycle)
ppj00620
Pyruvate metabolism
ppj00720
Other carbon fixation pathways
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
ppj01120
Microbial metabolism in diverse environments
ppj01200
Carbon metabolism
Module
ppj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppj_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RK21_00229
00620 Pyruvate metabolism
RK21_00229
09102 Energy metabolism
00720 Other carbon fixation pathways
RK21_00229
Enzymes [BR:
ppj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
RK21_00229
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
AJG11737
UniProt:
A0A099N3I4
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Position
complement(236556..238079)
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AA seq
507 aa
AA seq
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MTVIKQDDLIQSVADALQFISYYHPVDFIQAMHEAYLREESPAARDSIAQILINSRMCAT
GHRPICQDTGIVTVFIRVGMDVRWDGATMSVDDMINEGVRRAYNLPENVLRASILADPAG
ARKNTKDNTPAVIHYSIVPGDKVEVDVAAKGGGSENKSKMAMLNPSDSIVDWVLKTVPTM
GAGWCPPGMLGIGIGGTAEKAAVMAKEVLMESIDIHELKARGPQNRLEEIRLELFEKVNQ
LGIGAQGLGGLTTVLDVKIMDYPTHAASLPVCMIPNCAATRHAHFVLDGSGPAELEAPSL
DAYPEIVWEAGPSARRVNLDAITPEEVASWKPGETILLNGKMLTGRDAAHKRMVEMLNRG
EELPVDLKGRFIYYVGPVDPVGDEVVGPAGPTTATRMDKFTRQILEQTGLLGMIGKSERG
PAAIEAIKDNKAVYLMAVGGAAYLVAQAIRKSKVLAFAELGMEAIYEFEVKDMPVTVAVD
SNGESVHITGPALWQSKIAQSLAVEVK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatc
tcgtactaccaccccgtcgatttcatccaggccatgcacgaggcctatctgcgtgaagaa
tcgcctgctgcgcgcgattccatcgcccagatcctgatcaactcgcgcatgtgcgccact
ggccatcgcccgatctgccaagacaccggtatcgtcaccgtgttcatccgcgtgggcatg
gacgtgcgctgggacggcgccaccatgagcgtcgacgacatgatcaacgaaggtgtgcgt
cgcgcctacaatctgcctgaaaacgtcctgcgcgcttcgatcctggccgacccggccggt
gcccgcaagaacaccaaggacaacaccccggcagtgatccactactccatcgtccccggc
gacaaggtcgaggtcgatgtcgcagccaaaggcggcggctcggagaacaagtcgaagatg
gccatgctcaacccgtccgactcgatcgtcgactgggtactgaagactgtcccgaccatg
ggcgctggctggtgcccgcctggcatgctcggcatcggcatcggcggtaccgccgagaag
gccgccgtcatggccaaggaagtgttgatggagtccatcgacatccacgaactgaaagcc
cgtgggccgcagaaccgtctggaagaaatccgcctggaactgttcgagaaggtcaaccag
ctgggcatcggcgcccagggcctgggtggcctgaccaccgtgctcgacgtcaagatcatg
gactacccgacccacgccgcttcgctgccggtgtgcatgatccccaactgcgccgccacc
cgccacgcccacttcgtgctcgatggctccggcccggccgagctggaagcgccgtcgctg
gacgcctacccggaaatcgtctgggaagccggcccgagcgcccgtcgcgtcaacctcgac
gccatcaccccggaagaagtcgcgagctggaagccgggcgaaaccatcctgctcaacggc
aagatgctgaccggccgcgatgccgcgcacaagcgcatggtcgaaatgctcaaccgtggc
gaagaactgccggtggacctgaaaggccgcttcatctactacgttggcccggtcgacccg
gtcggtgacgaagtggtaggcccagccggcccgaccaccgctacccgcatggacaagttc
acccgccagatcctcgagcagaccggcctgctcggcatgatcggcaagtccgagcgcggc
cctgccgccatcgaagcgatcaaggacaacaaggccgtgtacctgatggccgtcggcggt
gctgcctacctggtggcccaggccatccgcaagtcgaaggtcctggccttcgccgagctg
ggcatggaagcgatctacgagttcgaggtcaaggacatgccggtgaccgtcgccgtggac
agcaacggtgagtcggtacacatcactggccctgccctgtggcagagcaagattgcccag
agcctggcagtcgaagtgaagtaa
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