Pseudomonas plecoglossicida: RK21_00287
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Entry
RK21_00287 CDS
T03646
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppj03009
]
RK21_00287
Enzymes [BR:
ppj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RK21_00287
Ribosome biogenesis [BR:
ppj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RK21_00287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AJG11795
UniProt:
A0A099N5P4
LinkDB
All DBs
Position
complement(301272..301964)
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AA seq
230 aa
AA seq
DB search
MRLDRFLANLPSHNRQQVRLMLAQRRVRVDGQVVSDPLAEVREFSRVELDDQLLQAGRPA
RYLMLHKPAGCVSATQDPQHRTVLDLLPAGLREDLHIAGRLDFNTTGLMILTNDGQWSRR
LTQPATKLPKHYLVQTEDEIGEHYVAKFLEGFYFAFEDLTTLPAQLNILGPRQARLSIIE
GRYHQVKRMFGHFDNKVVGLHRESMGAIRLDPGLAPGAFRELTADEIATV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgaccgtttcctcgccaacctgcccagccacaaccgccagcaagtccgtctg
atgctggcgcaacgccgtgtgcgggtggatggccaagtggtcagcgacccactggccgaa
gtgcgcgaattcagccgcgtggagctggacgaccagctgctgcaggctggccgcccggca
cgctacctgatgttgcacaagccggcaggctgcgtcagcgccacccaggacccgcaacac
cgcaccgtgctcgacctgctgccagccggtttgcgtgaggacctgcacattgccgggcgg
ctggacttcaacactacgggcttgatgatcctgaccaacgatggccaatggtcacgccgg
cttacccagcccgcgaccaagctgcccaagcactacctggtgcaaaccgaggacgagatt
ggcgagcactatgtggccaagttcctcgagggcttctacttcgctttcgaagacctcacc
accctgcccgcccagctgaacatcctcgggccgcgccaggcacggctgtcgatcatcgaa
gggcgctatcaccaggtgaagcgcatgttcggccatttcgacaacaaggtggtggggttg
catcgggagagcatgggggcgatccggcttgacccggggttagcgcctggggcgtttcgt
gagctgacggcggatgaaatagcgacggtctaa
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