Pseudomonas plecoglossicida: RK21_00460
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Entry
RK21_00460 CDS
T03646
Name
(GenBank) MiaB-like tRNA modifying protein YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppj03009
]
RK21_00460
Enzymes [BR:
ppj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RK21_00460
Ribosome biogenesis [BR:
ppj03009
]
Prokaryotic type
ribosomal protein modification factors
RK21_00460
BRITE hierarchy
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AJG11968
UniProt:
A0A099N4J7
LinkDB
All DBs
Position
complement(496675..498006)
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGSIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDRTLARIKNWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEEVPDDVKQD
RWDRFMAHQQAISAARLQLRIGKEIDVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacgcccgccacccccaaggtaggtttcgtaagcctgggttgcccaaaagcc
ctggtcgattccgagcgcatcctgacccagttgcgcatggaaggctatgaagtcgtgccc
acctacgaggacgccgacgtagtggtggtcaacacctgcggcttcatcgacagcgccaag
gccgagtcgttggaagtgatcggcgaagcgatcaaggaaaacggcaaggtcatcgtcacc
ggctgcatgggtgtcgaggaaggcagcatccgcgacgtacacccgagcgtgctgtcggtc
accggcccgcagcagtacgagcaggtggtcaacgccgtgcacgaagtggtgccaccacgc
caggaccacaacccgctgatcgacctggtgccgccgcagggcgtcaagctgaccccgcgc
cattatgcgtacctgaagatttccgaaggctgcaaccacagctgcagtttctgcatcatc
ccgtcgatgcgcggcaaactggtcagccgcccggtcggcgaagtgctgagcgaggccgag
cgcctggtcaaggccggggtcaaggagatcctggtgatttcccaggacaccagcgcctac
ggcgtcgacgtcaagtacaagaccgacttctggaacggccgcccggtcaagacccgcatg
ctcgagctgtgcgaagccctgagcagcctgggtgcctgggtacgtctgcactacgtgtac
ccgtacccgaacgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccgtac
ctggatatcccgttccagcacgccagcccgaaagtgctcaaggccatgaagcgcccggcc
ttcgaagaccgcaccctggcacgtatcaagaactggcgcgagcagtgcccggagctggtg
attcgctccaccttcatcgtcggcttcccgggcgagaccgaggaagacttccagtacctg
ctggactggttgaccgaagcccagctggaccgcgtgggctgcttccagtactcgccggta
gaaggcgccccggccaacgacctgggcctggaagaagtgccggacgacgtcaagcaggac
cgctgggaccgcttcatggcccaccagcaggccatcagcgccgcccgcctgcaactgcgc
atcggcaaggaaatcgacgtgctgatcgatgaagtggaagagcaaggttcggttggccgc
agcttcttcgatgccccggaaatcgacggcagcgtgttcatcgatggcgaccacggcttc
aagccgggtgacaaggtacgttgccgcgtggtggatgccgacgaatacgacatgtgggct
gaacccatctaa
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