Pseudomonas plecoglossicida: RK21_00479
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Entry
RK21_00479 CDS
T03646
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RK21_00479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_00479
Enzymes [BR:
ppj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RK21_00479
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RK21_00479
RecFOR pathway proteins
RK21_00479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
AAA_16
TIP49
Mg_chelatase
AAA_17
AAA_14
nSTAND3
AAA_2
RNA_helicase
Rad17
AAA_28
ABC_tran
AAA_18
NTPase_1
TsaE
NB-ARC
AAA_24
RsgA_GTPase
AAA_33
NACHT
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJG11987
UniProt:
A0A099N526
LinkDB
All DBs
Position
517944..518990
Genome browser
AA seq
348 aa
AA seq
DB search
MIEADRLIAASGRDREEVQDRAIRPLRLDEYIGQPVVREQMALFIQAARGRSESLDHTLI
FGPPGLGKTTLANIIAQEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYSDKDLATIVSRSAGILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKG
QITKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDV
LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNVPGRLGEGGDFSETGDE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaagccgaccgcctgatcgccgccagtggccgcgaccgtgaagaagtccaggac
cgtgcgatccgcccgctgcggctggacgagtacatcggccagccggtggtgcgcgagcag
atggcgctgttcatccaggccgcccgtggccgcagcgagtcgctcgaccatacgctgatc
ttcggtccgcccggcctgggcaagaccaccttggccaacatcattgcccaggaaatgggc
gtgtcggtcaagagtacctctgggcccatcctcgagcgcccgggcgacctcgcggccatg
ctgaccaacctcgaaccgcacgatgtgctgttcatcgacgagatccaccggttgtcaccg
gtcgtcgaagaggtgctgtacccggcgatggaggacttccagctcgacatcatgatcggc
gaagggcctgcggcccgttcgatcaagctggacctgccgccgttcaccctggtcggtgcc
accactcgtgccggcatgctcaccaacccgctgcgggaccgcttcggtatcgtccagcgc
ctggagttctacagcgacaaggaccttgccaccatcgtcagccgttcggccggcatcctt
ggcctggccatcgaagaccaaggtgcctacgagatcgcccgccgggcccgtggcacgcca
cgtatcgccaaccgcctgctgcgccgcgtgcgcgactacgccgaagtgcgcggcaagggc
cagatcaccaaggccgtggccgacatggcgctcaacctgctggacgtcgacgagcgcggt
tttgaccactccgaccgccgcctgctgctgaccatgatcgagaagttcgacggtggcccg
gtcggcgtggacaacctggcggcagccatcagtgaagagcgccacaccatcgaggacgtg
ctcgagccgtacctgatccagcaaggctacatcatgcgcacgccgcgcggccgcgtggtc
acccgacatgcctacctgcacttcggcctgaacgtgcccgggcgcctgggggagggtggg
gatttttccgaaacgggcgatgagtga
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