Pseudomonas plecoglossicida: RK21_00615
Help
Entry
RK21_00615 CDS
T03646
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K16053
miniconductance mechanosensitive channel
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_00615
Transporters [BR:
ppj02000
]
Other transporters
Pores ion channels [TC:
1
]
RK21_00615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
PMT_4TMC
Motif
Other DBs
NCBI-ProteinID:
AJG12123
UniProt:
A0A099N2L7
LinkDB
All DBs
Position
complement(680239..681540)
Genome browser
AA seq
433 aa
AA seq
DB search
MDIQRIWRDSLDLWGTLDQHPMLHAAIGLAVLLLVSLVIGRLARFLVLHGARLLARQPAL
KWLDDLRNNKVFHRLAQTTPSLVLQFGLKLVPELSDTAQHFLGNVALAFTLLFMTMALSC
LLDALLDIYARTEHARTRSIKGYVQLAKMMLWIFASIVIVATLIDRSPLLLLSGLGAMSA
VLLLVYKDTLLSFVASVQLTSNDMLHVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIV
SIPTWRLMSESFRNYRGMQQSGGRRIKRSLFIDAAGVRFLTREEEQRLSQVHLLADYLAG
KRQELQRWNEAMGPVAELSANRRKLTNIGTFRAFALAYLKNHPNVHPNMTCMVRQMQTTA
EGVPLEIYCFTTTTVWADYERIQGDIFDYLLAVLPEFGLSLYQQPSGNDMRAGLSGRVSQ
EPVPRRLEDMSEA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatatccaacgaatctggcgtgactccctcgacctgtggggcacccttgaccaacat
ccgatgctgcacgcggccatcggcctggcggtgctgctgctggtttccctggtcatcggc
cgcctggcacgcttcctggtgttgcacggcgcccgcctgctcgcccgccagccagcgctg
aagtggctggacgacctgcgcaacaacaaggttttccaccgcctggcacagaccacgccg
tcactggtgctgcagttcggcctgaaactggtgcccgagctgtccgacaccgcccagcac
ttcctcggcaatgtcgccctggcctttaccctgctgttcatgaccatggcgttgtcgtgc
ctgctggatgccctgctcgacatctacgcccgcaccgaacacgcccgcacccgctcgatc
aagggttacgtgcaactggccaagatgatgctgtggatcttcgcctccatcgtcatcgtc
gccaccctgatcgaccgctcgccactgttgctgctgtcgggtctgggtgccatgtcggcg
gtgctgctgttggtgtacaaggacaccctgctgtcgttcgtcgccagtgtgcagctgacc
agcaacgacatgctgcacgtgggcgactggatcgaaatgccccaggtgggcgccgatggc
gatgtggtggacatcaccctgcacaccgtgaaagtgcaaaacttcgacaagaccattgtc
tccatccccacctggcgcctgatgagcgagtcgttccgcaactaccgcggcatgcagcag
tccggtggccgacgcatcaagcgcagcctgttcatcgacgcggccggcgtgcggttcctg
actcgcgaggaagaacagcggctgagccaggtgcacttgctggccgactacctggccggc
aagcgccaggagctgcagcgctggaacgaggccatggggccggtggccgagctgtcggcc
aatcgccgcaagctcaccaacatcggcaccttccgagcgtttgccctggcctatctgaag
aatcatcccaacgtgcacccgaacatgacctgcatggtgcggcagatgcagaccaccgcc
gagggcgtgccgctggagatctactgctttaccaccaccacggtgtgggcggattacgag
cggattcagggggatatcttcgactacctactggcggtgttgccggagtttggcttgagc
ctgtatcagcagccgagtggcaacgacatgcgggcggggttgagcgggcgtgtatcgcaa
gagcctgtgccgcgtcggctggaagacatgagcgaggcttga
DBGET
integrated database retrieval system
