Pseudomonas plecoglossicida: RK21_00728
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Entry
RK21_00728 CDS
T03646
Name
(GenBank) Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj02020
Two-component system
ppj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RK21_00728
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RK21_00728
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppj02022
]
RK21_00728
02035 Bacterial motility proteins [BR:
ppj02035
]
RK21_00728
Two-component system [BR:
ppj02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
RK21_00728
Bacterial motility proteins [BR:
ppj02035
]
Flagellar system
Flagellar assembly proteins
Others
RK21_00728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
FleQ
AAA
MCM
HTH_20
MerR
HTH_30
AAA_3
AAA_19
Mg_chelatase
AAA_2
HTH_24
HTH_28
DUF2249
Sigma70_r4_2
nSTAND3
HTH_23
HTH_11
HTH_1
ATPase
AAA_22
HTH_17
AAA_7
HTH_Mga
Xre-like-HTH
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
AJG12236
UniProt:
A0A0B5K9H4
LinkDB
All DBs
Position
796907..798262
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AA seq
451 aa
AA seq
DB search
MAIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEEAFSLVISDVNMPGMD
GHQLLAQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAVDYLVKPFEPKALLSLVERHAAG
RVTGEEGPVACEPASRQLLELAARVARSNSTVLISGESGTGKEVLARFIHQQSPRAAQPF
VAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKL
LRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRPLR
ERPGDILQLAERLLARHVAKMKHAPVRLSPQARACLQAHAWPGNVRELDNALQRALILQQ
GGVIEAADFCLAGAIPLSAGTELSPEAAVEASGLGDDMRRHEYQMIIDTLRVERGRRKEA
AERLGISPRTLRYKLAQMRDAGFDVEASLFG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaaggtgctgctggtcgaagacgaccgcgtattgcgccaggcgctgggcgat
accctggagatcggcggtttcgcctaccaggccgtgggcagtgctgaagaagcgctggaa
gctgtgctggaggaagccttcagcctggtgatcagcgatgtgaacatgcccggcatggat
gggcaccaactgctggcccagctgcgccgccagcagccgcagttgccagtgttgctgatg
accgcgcacgctgcggtggagcgcgctgtcgaggcaatgcgccagggcgccgtcgactat
ctggtcaagccgttcgagcccaaggcgttgctcagcctggtcgaacggcatgcggctggg
cgtgtgactggcgaagaaggcccggtggcctgcgaaccggccagccgccagttgctggag
ctggccgcgcgggtggcgcgcagcaactcgaccgtactgatttccggtgagtccggtact
ggcaaggaagtgctggcgcgcttcattcaccagcagtcaccgcgggcggcgcagcctttc
gtggcgatcaactgcgcggcgattcccgacaacatgctcgaggccaccctgttcggccat
gagaagggcgccttcaccggcgccatcgctgcccaggctggcaagttcgagcaggccgaa
ggcggcaccttgctgctcgacgaaatctcggaaatgcccatggccttgcaggccaagctg
ttgcgcgtgctgcaagagcgtgaagtggagcgggtaggtgggcgcaagccgatcagcctg
gacatccgcgtgctggctaccaccaaccgtgacctggccggcgaggtagcggccgggcgc
ttccgtgaagacctgttctaccgcctgtcggtgttccctctggcctggcggccgctgcgc
gagcgcccgggtgacatcctgcaactggccgagcgcctgctggcgcggcatgtggccaag
atgaagcacgcgccggtgcgcttgtcgccccaggctcgcgcctgcctgcaggcgcatgcc
tggccaggcaacgtgcgtgaactggacaacgccttgcagcgggcgttgatcctgcagcag
ggcggagtgatcgaggcggcggatttttgtctggcgggcgccattccattgtcggctggc
acagagctatcacctgaggcggctgttgaagccagtggcctgggtgacgacatgcgccgc
cacgagtaccagatgatcatcgacaccctgcgcgtcgagcgcggccgccgcaaagaagct
gccgaacgcttgggcatcagcccgcgtaccttgcgttacaagctggcgcagatgcgcgat
gccgggtttgacgtcgaggccagcctgttcggctga
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