Pseudomonas plecoglossicida: RK21_00811
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Entry
RK21_00811 CDS
T03646
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_00811
Transcription factors [BR:
ppj03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RK21_00811
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_24
HTH_IclR
LWR_salt
Motif
Other DBs
NCBI-ProteinID:
AJG12319
LinkDB
All DBs
Position
complement(874874..875485)
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AA seq
203 aa
AA seq
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MSTIRERNKELILRAASEEFADKGFAATKTSDIAAKAGLPKPNVYYYFKSKDNLYREVLE
SIIAPIMQASTPFNADGDPKEVLSAYIRSKIRISRDLPHASKVFASEIMHGAPHLSPNQV
AQLNEQARHNIECIQRWIDRGQIAHVDAHHLMFSIWAATQTYADFDWQISAVTGKAKLAD
SDYDAAAETIIRMVLKGCEPEVA
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccattcgcgagcgcaacaaggaactgatcctgcgcgcggccagcgaggaattc
gccgacaagggcttcgccgccaccaagaccagcgatatcgcggccaaggccggcctgccc
aagccgaacgtgtattactacttcaaatccaaggacaacctctaccgcgaggtcctggaa
agcatcatcgcgccgatcatgcaggcgtcgaccccgttcaatgccgacggtgacccgaag
gaagtgctgagtgcgtacatccgctcgaagatccgcatttcgcgcgacctgccgcatgcg
tccaaggtgttcgccagcgagatcatgcacggtgccccgcacctgtcgccgaaccaggta
gcgcagctgaacgagcaggcgcgccataacatcgagtgcatccagcgctggatcgaccgc
gggcaaatcgcccatgtggatgcgcatcacctgatgttcagcatctgggcagcgacccag
acttatgccgatttcgactggcagatctctgccgtgaccggcaaggccaagctggccgac
agcgattatgacgcggcggcggagaccatcatccgcatggtgctcaagggctgcgagccc
gaggtagcctga
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