Pseudomonas plecoglossicida: RK21_00909
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Entry
RK21_00909 CDS
T03646
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00020
Citrate cycle (TCA cycle)
ppj00190
Oxidative phosphorylation
ppj00650
Butanoate metabolism
ppj00720
Other carbon fixation pathways
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
ppj01120
Microbial metabolism in diverse environments
ppj01200
Carbon metabolism
Module
ppj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppj_M00149
Succinate dehydrogenase, prokaryotes
ppj_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RK21_00909
00650 Butanoate metabolism
RK21_00909
09102 Energy metabolism
00190 Oxidative phosphorylation
RK21_00909
00720 Other carbon fixation pathways
RK21_00909
Enzymes [BR:
ppj01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RK21_00909
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AJG12417
UniProt:
A0A099N3C4
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All DBs
Position
990307..992079
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AA seq
590 aa
AA seq
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MASIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVIPTCHYMMG
GVATNIHGQAITMDAEGNDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTEGVEYRDASDTDVDVALNRLNKLNERTTGEDVASLKRELQSCMQNYFGVFRTGE
YMQKGIEQLAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRG
AHAREDYEDRDDENWLCHTLYYPGEKRVAKRGVNFAPKTVPAFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctagcattccaaccatttccttcgacgccatcatcatcggtggcggcggcgccggc
atgcgcgctgcgctgcagctggctcaaggcggccacaagactgccgtagtcaccaaggtc
ttcccgacccgttcgcacactgtatccgcccagggcggcatcacctgcgccatcgcttcg
gccgacccgaacgacgactggcgctggcacatgtacgataccgtcaagggctccgactac
atcggtgaccaggacgctatcgaatatatgtgtcaggaaggcccggctgcggtcttcgag
ctggaccacatgggcctgccgttctcgcgtaccgaaaccggtcgcatctaccagcgtccg
ttcggtggccagtccaaggacttcggtaaaggtggccaggctgcccgtacctgcgccgct
tccgaccgtaccggtcacgcgctgctgcacaccctgtaccagggcaacctgaaagccggc
accaccttcctcaacgagtactacgcagttgacctggtgaagaaccaggacggcgcattc
gttggcgtgatcgcgatctgcatcgaaaccggcgagaccctgtacatcaagtccaaggcc
accgtgctggcaactggcggtgccggccgtatctacgcctccaccaccaacgccctgatc
aacaccggtgacggcgtgggcatggccctgcgtgccggcgtgccggtgcaggacatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggtcaccgaaggttgc
cgcggtgagggtggctacctgatcaacgcccacggcgagcgcttcatggagcgttacgcg
ccgaacgcgaaagacctggccggccgcgacgtggtcgcccgttccatggtcaaggaaatc
atcgccggcaacggcgtgggcccgaacaaggaccacgtactgctgaagctggaccacctg
ggcgaggaagtgctgcacagccgcctgccaggtatctgcgagctgtccaagaccttcgcc
cacgtcgaccctgtggtcgcgccggtaccggtcatcccgacctgccactacatgatgggc
ggcgttgccaccaacattcatggccaggccattaccatggacgccgaaggcaacgaccac
atcatcccgggcctgttcgccgtaggtgaagtggcgtgcgtatctgttcacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggtgttcggccgtgctgccggcctgcac
ctggagaaggcgctgaccgaaggcgtggaataccgcgacgccagcgacaccgacgtcgat
gttgccctgaaccgcctgaacaagctgaacgagcgcaccaccggtgaagacgttgccagc
ctgaagcgcgagctgcagagctgcatgcagaactacttcggtgtattccgtactggcgaa
tacatgcagaagggtatcgagcagctggccggtctgcgtgaccgtatcgccaacgtcaag
atcaacgacaagtcccaggccttcaacaccgcgcgtatcgaagcgctggagctgcagaac
ctgctggaagtcgccgaagctaccgccatcgcggcagaagcccgtaaagagtcccgcggc
gctcacgcccgtgaagactacgaagaccgtgacgacgaaaactggctgtgccacaccctg
tactacccgggtgagaagcgcgtcgccaagcgtggcgtcaactttgcgccgaagactgtt
ccagccttcgaaccaaaagtccggacttactaa
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