Pseudomonas plecoglossicida: RK21_00962
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Entry
RK21_00962 CDS
T03646
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00330
Arginine and proline metabolism
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RK21_00962
Enzymes [BR:
ppj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
RK21_00962
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AJG12470
UniProt:
A0A0B5K7S2
LinkDB
All DBs
Position
1055421..1057670
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AA seq
749 aa
AA seq
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MYKDLKFPILIVHRAIKVDSVAGERVRGIAEELRQDGFAILAAADHAEACLVAATHHGLA
CMLIAAEGVGENTHLLQNMAELIRLARLRAPNLPIFALGEQVTLENAPAEAMSELNQLRG
ILYLFEDTVPFLARQVARAAHIYLDGLLPPFFKALVQHTAQSNYSWHTPGHGGGVAYRKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHAMVGRDDLVLVDRNCHKSVVHAIIMTGAIPLYLCPERNELGIIGPIPLSEFS
PEAIQAKIQANPLARDRGQRIKLAVVTNSTYDGLCYHAGLIKQTLGASVEVLHFDEAWFA
YAAFHEFFTGRYAMGTACAADSPLVISTHSTHKLLAAFSQASMIHVQDGARRQLDRDRFN
EAFMMHISTSPQYSILASLDVASTMMEGPAGRSLLQEMFDEALSFRRALANLREHIAADD
WWFSIWQPPSAEGIHRLAAQDWLLQPGAEWHGFGEVADDYVLLDPLKVTLVMPGLSAGGA
LGEHGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRHYDGN
TALSNCLPSVVAADASRYQGMGLRDLCDQLHGCYRANATAKQLKRLFTRLPEVAVSPARA
YDQMVRGEVEAVPIEALLGRVAAVMLVPYPPGIPLIMPGERFTEATRSIVDYLAFARAFN
QGFPGFVADVHGLQNESGRYTVDCIKECE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggacctcaagttccccatcctcatcgtgcaccgcgccatcaaggttgacagc
gtcgctggcgagcgtgtgcggggcatcgccgaggaactgcgccaggacggctttgccatc
ctcgccgccgccgaccatgccgaggcctgccttgtcgctgccacccaccatggcctggcc
tgcatgctgattgccgccgagggcgtcggcgagaatacccacctgctgcagaacatggcc
gagctgatccgcctggcccgcctgcgcgcccccaacctgccgattttcgccttgggcgaa
caggtgaccctggaaaacgcccccgccgaagccatgagcgagctcaaccagttgcggggc
atcctctacctgttcgaagacaccgtgccgtttcttgcgcgccaggtggcgcgtgccgca
catatctacctggacggcctgctgccgccgttcttcaaggccctggtgcagcacaccgcg
cagtccaattattcctggcacaccccggggcacggcggcggcgtggcctatcgcaaaagc
ccagtgggccaggcctttcaccagttcttcggggaaaacaccctacgctcggacctgtcc
gtttccgtgcccgagctgggctcgctgctcgatcacaccggccccttggccgaagccgaa
gccagggctgcgcgcaactttggcgccgaccacacctttttcgtcatcaacggcacctcc
acggccaacaagatcgtctggcacgccatggtcggccgcgacgacctggtgctggtggac
cgcaactgccacaagtcggtggtgcatgcgatcatcatgaccggtgccattcccctctat
ttgtgccccgagcgcaacgaactcgggatcatcggcccgatcccgctcagcgagttcagc
cccgaggcgatccaggcgaagatccaggccaaccctcttgcccgcgatcgcgggcagcgc
atcaagctggcggtggtgaccaactccacctacgacggcctgtgctaccacgccgggctg
atcaagcagaccctgggcgccagtgtcgaggtgctgcacttcgacgaagcctggttcgcc
tatgcggcattccacgagttctttaccgggcgctatgccatgggcacggcctgcgcggca
gacagcccgctggtgatcagcacccattccacccacaagctgctggccgcgttcagccag
gcctcgatgattcatgtgcaggacggggccaggcgccagctggaccgtgaccgcttcaac
gaagcgttcatgatgcacatctcgacctcgccgcagtacagcatcctcgcttcgctggac
gtggcctcgaccatgatggaaggcccggccgggcgttcgctgctgcaagaaatgttcgac
gaggcgctgagctttcgccgtgccctggccaacctgcgcgagcacatcgccgccgacgac
tggtggttcagcatctggcagccgccgagcgccgaaggcatccaccgcctggcggcgcag
gactggctgctgcagccgggggcggagtggcacggctttggcgaagtggcggacgactat
gtgctgctcgacccgctgaaggtgaccctggtgatgccgggcctgagcgcgggcggtgca
ctgggcgagcatggcatcccggcggcagtggtcagcaagtttctctgggagcgggggctg
gtggtggagaaaaccggcctgtacagctttctggtgctgttctccatgggcatcaccaag
ggcaagtggagcaccttgctcaccgagttgctggagttcaaacgccactatgatggcaat
accgccctgagcaactgcctgccgagcgtggtggctgccgatgcctcacgctatcagggc
atgggcctgcgcgacctgtgcgaccagttgcatggctgctaccgcgccaatgccacggcc
aagcaactgaaacggttgttcacgcgcttgccggaggtagccgtgagcccggcccgggcc
tatgaccagatggtgcgcggtgaggtggaggcggtgccgatcgaggcgctgctggggcgg
gtggcagcggtgatgctggtgccgtacccgcctggtattccattgatcatgccgggggag
cggtttaccgaggcgacccgctcgatagtcgattacctggccttcgcccgggcgttcaac
cagggcttcccaggtttcgtcgccgacgtgcacggcctgcagaatgaaagcggccgctac
acggtggactgcatcaaggaatgcgaatga
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