Pseudomonas plecoglossicida: RK21_01847
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Entry
RK21_01847 CDS
T03646
Name
(GenBank) YD repeat-containing protein
Organism
ppj
Pseudomonas plecoglossicida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
TEN_YD-shell
DUF6156
Motif
Other DBs
NCBI-ProteinID:
AJG13355
UniProt:
A0A0B5KAC1
LinkDB
All DBs
Position
1983311..1987525
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AA seq
1404 aa
AA seq
DB search
MFEAARFGDEISHTSALGGFLIGAALGIALVATVAIATFTCGFGVALLAGLAAGIGGSLL
TAAGEAIGSMFSSPSGTITTASPNVFINSRKAARVEKSIGACDKHPGPVQIAEGSTNVFI
NSVAAARKGDKLTCGATISGGSDNVIIGGGTYRYLPVDDEIPEWLRTTVDVLMAIAGAAG
GIAQLIKAGTQAGMKAIMPCALKFTAGFVAGEVASRYVVEPVARRAIGGLVGNPVDLTTG
RKLIPDEIDFSLPGLMPIEWSRFYASDLTVDSVLGRGWVLPWEQSLRRQGSFIYLTDNQG
REIPFVTLQPGQRIYNPHEQVYLVCTEGGHYILQTLDNLFFYFGEVPDTNSEVPLQRIEN
ALGHFLHFTRTPDGTLTDISATGGTRVHLHYDNPLGRLTDIKRVVNNEAVETLTQYRYDE
HGQLSAVINRNGDTVRSFSYAEGLMVTHSNALGLGCHYRWETLGDKPRVVEHWTSDGEHY
HFRYDLDARTSWATDVLGRELEVQYNADHRVLASRDYGGERYAIELDEQGNMVGLDLPDG
NRLAFKYDEYARLLEETDPLGRKTTYEYHHLTTLVTQVSYPDGSTWRARYDDKGNLLAEF
DALGQMTEYLNSDDGLPHTIIDATYKSKYLWWNTLAQVERYQDCSGKSTWYRYDERQHLV
AVTDALNQTTTLERKPDGEVLRISHPDGTAETFTYNVYGQVISHTDGKGQTTRLMRTARG
LPSSRQDAKGQRVRYEYDKAVRLIALVNENNATYRFAYDASDRLSEEVRVDNLTRRFSYN
VGGHLTRLDEIGYGENAERPERHTLFERDTIGRLVAKINRDARQDYAYDDGDRLLSIERQ
PTGIGKQLGITEEKLEYAYDLLGRLTKEIIPDGTLGYEYDPLGNLTTLTLPDGRKVNHLY
YGSGHLHQLNLDGQVISDMERDDLHREVYRTQGKLTSCFGYDAMGRKAWQFASNLPADKL
SQVHNTGINTSLLVEHAYNPIHRRYQYDPAGELVRTLDKLRGEIKYEYEANGQLRSRDTG
SLVGSEEFRYDAAANRLDFNARQFDKVKDNRIRQWRDQEYRYDPWGNLIEKRSGHSKLQS
FSYDCENRLVRAETVVNGKLESTGQYRYDSLGRRVAKQAEINGQVEQKRFLWQGLRMLHE
ETPGQSILYLYEPGSYAPLARIDQVEGEEQKLYYFHTDQIGTPLELTNSDGKIVWQATYR
SWGEIEQITVNRVEQNLRFQGQYYDVETGIYNNTFRYYDSQIGRFCTQDPIGLNGGLNLY
QYVPNPLSWIDPWGWMPFWKPLKPDGMGHHPFPRAHANTHGFPELGTKLDSPSWFPNEIE
GSDKLHQQFHDAIKKEGVPFNKKFEGTSEELVKKLNKAYEGFPQKGTLKIPRTGQVLAKD
VTIGEALTKSLGKGSGNNSAGGCG
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagcggccaggttcggcgacgagatatcgcacaccagcgcgctggggggcttc
ctgatcggggcagccctgggcatcgcgctggtggccacggtggccatcgccaccttcacc
tgtgggttcggcgtggccttgctggccggcctcgcagccggcatcggaggcagcttgctg
accgccgccggagaggcgataggcagtatgttctcgtccccctcagggacgataaccact
gcctcacccaacgttttcatcaacagccgcaaggccgcccgcgtcgaaaaaagcatcggt
gcctgcgacaagcaccctggcccggtgcagatcgccgaaggctcgaccaatgtcttcatc
aacagcgtcgcggctgcacgcaagggcgacaagctgacctgcggcgcgaccatttccggt
gggtcggacaacgtcatcatcggcggtggcacctaccgctatctgccagtggatgacgag
atcccggagtggctgcgcaccaccgtggatgtgctgatggccatcgccggtgccgcgggt
ggtatcgcgcagttgatcaaggccggtacgcaagccggcatgaaagccataatgccttgc
gccctgaagttcaccgccggcttcgtcgctggcgaggtagccagccgctacgtggtcgaa
cccgtcgcccgcagggccatcggcggcctggtcggcaacccggtcgacctcaccaccggc
cgcaaactgatccccgacgaaatcgacttcagcctgcctggcctgatgccgatcgagtgg
tcacgcttctacgccagcgacctgactgtcgatagcgtgctcggtcgcggctgggtgctg
ccttgggagcagagcctgcgccgccagggctcgttcatctacctcaccgacaaccagggc
cgcgaaatcccgttcgtgaccttgcaaccgggccagcgcatctacaacccgcacgaacag
gtgtacctggtatgcaccgagggcggccactacatcctgcaaaccctcgacaacctgttc
ttctatttcggcgaagtgccagacaccaacagcgaagtgccgctgcaacgcatcgaaaac
gccctcggccacttcctgcatttcacccgcacgcccgatggtacgctgaccgacatcagc
gccaccggcggtacccgcgtgcacctgcactacgacaacccgctgggtcgcctgaccgac
atcaaacgcgtggtgaacaacgaagcggtggaaacgctcacccagtaccgctatgacgaa
cacggccagctgagcgcggtgatcaaccgcaacggcgacacggtgcgcagcttcagctac
gccgaaggcctgatggtaacccacagcaacgcgctgggcctgggctgccactaccgttgg
gaaaccctcggcgacaagccgcgcgtggtcgagcactggaccagcgatggcgagcactac
cacttccgctacgacctcgacgcccgcaccagctgggccaccgacgtgctcggccgcgag
ctggaagtgcagtacaacgccgaccaccgcgtgctcgccagccgtgactacggtggcgaa
cgctacgccatcgagctggacgagcagggcaacatggttggcctggatttgccggacggc
aaccggctcgccttcaagtacgatgaatacgcccgcctgttggaagaaaccgacccgctg
ggccgcaagaccacctacgaatatcaccacctgaccacgctggtgacccaggtcagctat
ccggacggcagcacctggcgagcgcgctacgatgacaagggcaacctgctcgccgaattc
gatgccctcggccagatgaccgagtacctgaacagcgatgacggcctgccgcataccatc
atcgatgcgacttacaagtccaagtacctgtggtggaacaccctggcccaggtcgagcgt
tatcaggactgctcgggcaagagcacctggtaccgctacgacgaacgccagcacctcgtc
gcggtgaccgatgcgctgaaccagaccaccaccctggagcgcaagcccgacggcgaagtg
ctgcgcatcagtcacccggacggtaccgcggaaaccttcacctacaacgtctacggccag
gtaatcagccacaccgacggcaagggccagaccacacgcctgatgcgtacggcgcgtggc
ctgccgagcagccgccaggatgccaagggccagcgggtacgctacgagtacgacaaggcc
gtgcgcctgatcgcgctggtcaatgagaacaacgccacgtaccgctttgcctatgacgct
tcggaccggctgagcgaagaagtgcgggtggataacctgacccggcgtttcagctacaac
gtcggaggccatctcacgcggctggatgagattggctatggcgaaaatgccgagcggccg
gagcggcatacgctgtttgagcgtgacaccattggccgattggtcgccaagatcaaccgc
gatgcgcgtcaagactatgcgtacgatgacggcgaccggttgctgagcatcgagcggcaa
ccgaccgggatcggcaagcagcttgggatcacggaagagaagctggagtacgcctacgat
ctgctggggcggctgaccaaagaaatcatccccgacggcacgctcggctacgagtacgat
ccgctcggcaacctgaccacattgaccctgccggatggccgcaaggtcaatcacctgtac
tacggcagtgggcatctgcaccagctgaacctggatggccaggttatcagcgatatggag
cgcgacgacctgcaccgcgaggtgtaccggacccagggcaagctcaccagctgcttcggt
tatgacgcgatggggcgcaaggcctggcagtttgcctcgaacttgccggccgacaagctt
tcgcaggtgcacaacaccgggatcaatacctcgttgctggtggagcatgcgtataacccg
atccaccgtcgctatcagtacgacccggcgggtgaactggtgcgcacgctggacaagctg
cggggtgagatcaaatacgagtacgaagccaacgggcagttgcgcagccgtgataccggc
tcgctggtgggcagcgaggagttccgctacgacgcggcggccaaccggctggacttcaat
gcgcggcagttcgacaaggtcaaggacaaccggatcagacagtggcgggatcaggagtac
cgttacgatccgtggggcaacctgatcgagaagcgctcgggacacagcaagctgcagagc
tttagctatgactgcgagaaccggctggtgcgggcggaaactgtggtcaacggcaagctg
gagagtaccgggcagtaccggtacgacagccttgggcgacgggtggccaagcaggcggag
atcaatggccaggtcgaacagaagcgcttcctctggcaaggcttgcggatgctgcatgag
gagacgccggggcagagcatcctgtacctgtatgagccgggcagctatgcgccgttggcg
cggatcgatcaggtggagggggaagagcagaagctctattacttccatactgaccagatt
ggtacgccgttggagcttacgaacagtgacggcaagatcgtctggcaggcgacgtatcgc
tcatggggtgagatagagcagataaccgtcaatagagttgagcagaacctacgttttcaa
ggtcaatactatgatgttgaaacgggaatttataataatacttttcgttattatgattcg
caaataggtaggttttgcactcaggatcctattggcctcaatggtggtctgaatttatat
caatatgtcccaaatccactatcctggatcgatccttgggggtggatgccattttggaag
cccttgaaacctgacggtatggggcaccatccgttcccccgtgctcatgcaaacacccat
gggttcccagagctaggtaccaagctcgactcgccatcatggttccccaatgagattgaa
ggttctgataagctacatcagcaattccatgatgcaataaagaaagaaggtgtaccgttt
aacaagaagtttgaagggacgtctgaagaattggttaagaagctaaacaaggcttacgag
gggttccctcaaaagggcacgttaaaaattcctcgtaccggacaagtgcttgcgaaagat
gtaactattggtgaggccctaactaagtcgcttggcaaaggcagtggtaacaattctgca
ggaggatgcgggtaa
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integrated database retrieval system
