Pseudomonas plecoglossicida: RK21_01857
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Entry
RK21_01857 CDS
T03646
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_01857
Transcription factors [BR:
ppj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RK21_01857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AJG13365
UniProt:
A0A099MZS9
LinkDB
All DBs
Position
complement(1997000..1997911)
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AA seq
303 aa
AA seq
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MLIDEELTLKKLETFLAFMRTGNLGRAAAELATSAVSVHRAIHSLESALRCPLFKHEGRQ
LIPLESAYVLEKKARQLIQDAEQMVRLTREAAGFYAERFRLGALYSLTVKTVPKLVMGLK
LRRSELNIDLTLGSNVDLLQRLKNHELEAILVSLDESVSDPACEQLPLFSDDIFLAVPID
SPFAEQAEVDLADLADSTFITLTQGFATHRDGARVFQQAGFEPKVAMQVNDIFTLLSMVS
SGVGFALLPGRIAAVYENRVRLIALKPQYRLQQHIGVVFLKAREREPNLLALLAECRMYS
LER
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgacgaagaactgaccctcaagaagctggaaaccttcctcgccttcatgcgc
accggcaacctcggccgcgccgccgcggagctggccaccagtgccgtcagcgtgcaccgc
gccatccactcgctggaaagcgcactgcgctgcccgctgttcaagcatgaaggccgccag
ctgatcccgctggaaagcgcctacgtgctggaaaagaaagcccgccagctgatccaggac
gccgagcagatggtccgccttacccgcgaggccgccggcttctacgccgagcgcttccgc
ctgggcgcgctctactcgctgacggtgaaaaccgtacccaagctagtcatgggcctcaag
ctgcgccgcagcgaactcaacatcgacctgaccctgggctccaacgtcgacctgctgcag
cgcctgaagaaccacgaactggaggccatcctcgtgtcgctcgacgaaagcgtcagcgac
ccggcctgcgagcagttaccgctgttctccgacgacatcttccttgccgtgcccatcgat
tcacccttcgccgagcaggccgaggtggacctggccgacctggccgactccaccttcatc
accctgacccagggctttgccacccaccgcgatggtgcccgggtgttccagcaggccggc
ttcgaacccaaggtagccatgcaggtgaacgatatcttcaccctgctgagcatggtcagc
tcgggcgtgggctttgccttgctgcctgggcggatcgcagcggtgtatgaaaaccgggtc
aggttgattgccctgaagccgcaatatcgcttgcagcagcatattggcgtggtgttcctc
aaggcgcgggagcgggagccgaacctgctggcgttgctggcagagtgccggatgtacagc
ctggagcgctga
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