Pseudomonas plecoglossicida: RK21_01859
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Entry
RK21_01859 CDS
T03646
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_01859
Transcription factors [BR:
ppj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RK21_01859
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_20
HTH_30
MarR_2
HTH_5
HTH_11
HTH_28
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AJG13367
UniProt:
A0A099N2A5
LinkDB
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Position
complement(1999090..1999989)
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AA seq
299 aa
AA seq
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MISDLPPLNALRAFASAARHQSFSRAAEELHVTHSAVSRHIRLLEEHLGIMLFERRNRQS
VLTPSGQAYYEQISLGLAQIANATQALARSSASRKVIINVRPSFAVRWLIPRLPEFMTQF
PEIQPEIVTSILAPDPSREAFDLVVRRGSAGWAANLEPNMLFEDELLLVAAPSLLEAIPV
QAPSDVLRHTLLSGRTRNGDWQAWCKLAGVSQARQRPALQFDHMHLVLQAAVDGLGLALC
PATLLGKDLATGRLHNPLPHLRLPLTRYYYGVSKDAVAETQVFIDWMLSRLQHDTCALP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgacctcccacccttgaatgccctccgggcctttgcctcggccgcgcgacac
cagagcttcagccgtgccgccgaggagctgcacgtcacccacagtgctgtcagccgccat
atacgcctgctcgaagagcacctgggcataatgttgttcgaacgccgaaatcggcagtcg
gtactcaccccgagcggccaggcttactatgaacagatcagcctgggcctggcgcaaatc
gccaacgccactcaggccctggcccgaagcagtgcatcgcgcaaggtgatcatcaatgtg
cgcccgtcctttgccgtgcgctggctgatccctcggttacccgaattcatgacgcagttt
ccagagattcagcccgagattgtgaccagcatcctggcccctgacccctcgcgtgaggcc
ttcgatctggtggtgcgccgtggcagcgcaggctgggcggccaatctggaaccgaacatg
ctgttcgaggacgagctgctgctggttgccgcgccttctcttctggaagcgataccggtt
caggcgccgtcggatgtgctgcgccataccctgctctcgggcaggacacgtaatggggat
tggcaggcctggtgcaagctggccggtgtcagccaggcaagacaacggccagcgctgcag
ttcgatcacatgcacctggtgctgcaagctgccgtcgacggccttggcctggcgctgtgc
ccggccacgctgctgggcaaggatcttgccaccggccgactgcacaacccgctgcctcat
ctacgactgcccctgactcgctactactatggggtatcgaaagatgcggtcgccgagacc
caggtatttatcgactggatgctctctcggctccagcatgacacctgtgcacttccttga
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