KEGG   Pseudomonas plecoglossicida: RK21_02213
Entry
RK21_02213        CDS       T03646                                 
Name
(GenBank) conjugal transfer protein TrbD
  KO
K20529  type IV secretion system protein TrbD
Organism
ppj  Pseudomonas plecoglossicida
Pathway
ppj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RK21_02213
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppj02044]
    RK21_02213
Secretion system [BR:ppj02044]
 Type IV secretion system
  Trb secretion system protein
   RK21_02213
SSDB
Motif
Pfam: VirB3
Other DBs
NCBI-ProteinID: AJG13721
LinkDB
Position
complement(2359835..2360107)
AA seq 90 aa
MSGPDSFAAGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGVVLWIVG
HSLAVWGARVDPQFMAVFARHIKHRPLLDV
NT seq 273 nt   +upstreamnt  +downstreamnt
atgagcggcccggatagcttcgcggccgggttcgaggtgcctttgcatcgctcgctcacc
gagccgatcttgctgggcggcgcaccgcgcaccgtggcgattgccaacggcacgctggcc
gccgccgtcgggctgggcctgcaactgtggattcctggcgtggtgctctggatcgtcggc
cattcgctggcggtatggggtgcgcgcgtcgatccgcagttcatggccgtgttcgcccgg
cacatcaagcaccgcccgctgctggacgtgtga

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