Pseudomonas plecoglossicida: RK21_02311
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Entry
RK21_02311 CDS
T03646
Name
(GenBank) multidrug DMT transporter
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00270
Cysteine and methionine metabolism
ppj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RK21_02311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_02311
03032 DNA replication proteins [BR:
ppj03032
]
RK21_02311
03036 Chromosome and associated proteins [BR:
ppj03036
]
RK21_02311
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppj02048
]
RK21_02311
Enzymes [BR:
ppj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RK21_02311
Transcription factors [BR:
ppj03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RK21_02311
DNA replication proteins [BR:
ppj03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RK21_02311
Chromosome and associated proteins [BR:
ppj03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RK21_02311
Prokaryotic defense system [BR:
ppj02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RK21_02311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AJG13819
LinkDB
All DBs
Position
2436757..2438541
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AA seq
594 aa
AA seq
DB search
MTCMTSLALPFEKELVVDLFAGGGGASSGIAEAYREPDVAVNHNPIALAVHRANHPQTEH
YVADVFEVDPILATKGQPVGILWASPDCRHHSKAKGGKPRNRKIRGLAWVIIRWAYQTSP
RLIFLENVEEFADWGPLDDEGRPIKAEKGRTFQAFVNVLGNGIAEDHPDLPEILAEIGDH
VPKEALVRGLRYNFEHQVRVAADQGAPTIRKRLYGIARRDGKPIVWPAPTHHKNPGKGQK
GWRSAAECIDWELQGRTIFRDDALVENTMNRIAKGLWRHTLACNDPFIVPLRGTSKSHTS
THSVDDPVSTISGGGTHHALVQPTMAVAGCLTEHANSSTQRTFDAEEPLRTQVAQVKGGH
FALITANLVTLRNGCVGSPATGPVGCITRSGGHHAIASAHLEQANGGFYKGDGRSADDPF
STILGKGSNQRLVTAYMVKYYGAEKDGISMREPVHTIPSKDRMAVVQVVQLHSHTLTDEQ
LAGARKCAAFMRKYLPQHFTEHADVVMVGDYVMVDITLRMLKPHELKRAQGFRADYIIDR
GLFLDEETGRLYWKAISGADQVKLLGNSVCKDEARALVAANASDLIELYQRLAA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacctgtatgacctccctcgccctgcccttcgaaaaggagctggtcgtcgatctcttc
gccggtggcggcggcgccagcagcggcattgccgaggcttaccgcgagcctgatgtggct
gttaatcacaacccaatcgccctggcggtgcaccgcgcgaaccacccacagaccgagcac
tacgtggcggacgtgttcgaggtcgaccctatcctggccaccaaaggtcaaccggtcggc
attctgtgggcatcgcccgattgccgccaccacagcaaggccaagggcggaaaaccgcgc
aaccgcaaaattcgtggccttgcctgggtgatcatccgctgggcataccagaccagccca
cggctgatcttccttgaaaacgtggaagagttcgccgactggggaccgctcgacgatgaa
gggcgaccgataaaggccgagaaaggccggacgttccaggccttcgtgaacgtgctgggc
aacggcattgcagaggaccacccagatctgccggagatcctggccgagatcggcgaccat
gtgcccaaggaagcactggtgcgcgggctgcgctacaacttcgagcaccaggtgcgagtt
gccgcagaccagggcgcacccactatccgcaagcgcctgtacggcatcgctcggcgcgac
ggcaagccaatcgtgtggccggcgccgacgcatcacaagaacccaggcaagggccagaaa
ggctggcggtccgccgctgaatgcatcgactgggaactgcagggccgcacgatcttccgc
gacgatgctttggtggaaaacaccatgaaccgcatcgccaaaggcctgtggcggcacacc
ctggcttgcaacgacccgttcattgtcccgctgcgcggcacctcgaagtcgcacaccagc
acgcacagcgttgacgatccagtttccaccatcagcggcggcggcacccatcacgcactg
gtgcaacccacaatggccgtggcgggctgcctcactgagcacgccaacagctctacacag
cgaaccttcgatgccgaagaacctctgcgcacgcaagttgctcaggtcaagggcggtcat
ttcgcactgatcactgccaacctggtgacgctacgcaacggctgcgtggggtcaccggca
accggccctgtcggctgcatcacacgcagcggcgggcatcacgccatagcctcggctcac
cttgagcaagcgaacggcgggttctacaagggcgacggtcgcagcgcggatgatccgttc
tcgacgatcctgggcaagggctccaatcagcgcctggtaacggcctacatggtcaagtac
tacggcgcggagaaggacggcatctcaatgcgggagccggtgcacaccatcccgtcaaag
gatcgaatggcagtcgtgcaggtcgtccagctgcacagccacacgctgaccgacgagcaa
ctggccggcgcccgcaagtgcgcagcctttatgcgcaagtacctgccccagcacttcact
gagcacgccgacgttgtgatggtcggcgattacgtgatggtcgacatcaccctgcgcatg
ctcaagccgcacgaattgaagcgcgctcaagggttccgggccgactacatcatcgaccgc
gggctgttcctcgatgaggaaactggccggctgtactggaaggcaatctccggcgccgac
caggtgaagctgctgggcaacagcgtctgcaaagacgaagcccgggcgctggtcgccgcg
aacgcctccgacctcatcgaactctatcagcgcctggcggcctga
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