KEGG   Pseudomonas plecoglossicida: RK21_02467
Entry
RK21_02467        CDS       T03646                                 
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ppj  Pseudomonas plecoglossicida
Pathway
ppj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RK21_02467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppj03019]
    RK21_02467
   03110 Chaperones and folding catalysts [BR:ppj03110]
    RK21_02467
   03029 Mitochondrial biogenesis [BR:ppj03029]
    RK21_02467
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppj04147]
    RK21_02467
Enzymes [BR:ppj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     RK21_02467
Messenger RNA biogenesis [BR:ppj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RK21_02467
Chaperones and folding catalysts [BR:ppj03110]
 Heat shock proteins
  HSP60 / Chaperonin
   RK21_02467
Mitochondrial biogenesis [BR:ppj03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    RK21_02467
Exosome [BR:ppj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   RK21_02467
  Exosomal proteins of other body fluids (saliva and urine)
   RK21_02467
  Exosomal proteins of breast cancer cells
   RK21_02467
  Exosomal proteins of colorectal cancer cells
   RK21_02467
  Exosomal proteins of bladder cancer cells
   RK21_02467
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AJG13975
UniProt: A0A0B5KC19
LinkDB
Position
complement(2595940..2597559)
AA seq 539 aa
MPHSKILFRSAAREKILSGATQLADAVRVTLGPKSKSVLMQSSWGKPTVCNDGVTIAKRV
FLQDPEENLGAQMLRQAAERTGEAVGDGTSTATVLAHAILADGVRNVVAGASAIDLKRGL
DKGLALVIKSLLAQSRQVCTAKEKAQVATLSAHNDPLIGQLVADALEKVGVEGVVSIEES
KTTETKVEIMDGMRFDRGYVSPYFVTDTEKMQVELTDACVLLCDHKIGALNDLLPLLEQV
AKSGQPLVVIAEDIDGEALTTLVVNQIRGVLRAVAVKAPGYGDRRKEILQDIAVLTGATL
VSAELGVTLDQLQLSQLGQVHRAVVLKDSTALIGGSGTQQAVATRVAHIRAQIEASTSDY
DREKLHERLARLAGGVAVIRVGAPSEAEMKARKDALDDALAATRAAIAEGIVPGAGLALL
KTVSVLLAEEANSEGDMRTGLQILRRALEAPARMIADNSAVDAGVVVARMLAETGSIGFD
AAANTYVDLYEAGIIDPTKVVRIALENAVSVASILLLTEATMTDIPEKPAPLMQPPIPE
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgccccacagcaaaatcctgtttcgctccgcagcgcgggagaaaatcctcagtggtgcc
acccagctcgccgatgccgtgcgcgttacgctagggcccaaatcgaaatcggtactgatg
caaagcagttggggtaaaccgactgtctgcaacgatggcgtgaccatcgccaaacgcgtc
tttctgcaggatccggaggaaaacctcggcgcacagatgctgcgccaggcggccgagcgc
actggtgaagcggtgggtgatggcaccagtaccgcaactgtgctcgctcacgcgatcctg
gccgacggcgtgcgcaacgtggtggccggagccagtgccatcgatctcaagcgaggcctg
gacaagggcttggcgctggtcatcaaatcgttgctggcgcagtcacgacaggtctgcact
gccaaggaaaaagcacaagtggcgacgttgtcagcgcacaacgatccgttgattggccag
ttggtcgccgatgccctggaaaaggttggcgtggaaggtgtggtcagcatcgaggaatcc
aagaccaccgaaaccaaggtcgagatcatggatggcatgcgcttcgaccgaggctatgtg
tcgccttacttcgtcaccgacaccgagaagatgcaggtcgaactgaccgatgcctgtgtc
ttgctatgcgatcacaagatcggcgcactcaacgatctgctacccctgctggaacaggtg
gcgaaaagcggtcagccgctggtggttattgccgaggacatcgacggcgaggccctgacc
acgctggtagtcaaccagatccgcggcgtactgcgcgcggtggcggtgaaggctcctggg
tatggcgaccggcgcaaggaaatacttcaggacatcgcggtgctcacgggggcgaccctg
gtgtcggcagagcttggcgtcacgctcgatcagttgcagctgtcccagcttggccaagtg
caccgtgcggtggtgttgaaggacagcaccgcgttgattggaggcagtggcacgcagcaa
gcggtggctacccgcgttgcgcatatccgcgcccagatcgaggccagcaccagcgattat
gatcgggaaaaactgcacgaacgcctggccaggcttgccggcggagtggcagtgatacgt
gtcggggcaccctccgaggcggagatgaaagcgcgcaaggacgcattggacgatgccctg
gccgccacccgtgcagccatcgccgaaggcatcgtgcctggcgccggcctggctttgctg
aagactgtgtcggtgttgctcgctgaagaggcgaacagcgaaggcgatatgcgtacgggc
ctgcagatactgcgccgtgcgctggaggccccggcgcggatgattgccgataattccgcg
gtggatgcgggtgtggtggtggcacgcatgctcgccgaaacgggcagtatcgggttcgac
gcggcggccaacacctatgtcgacctgtacgaggccggcatcatcgaccccaccaaagtg
gtgcgcatcgccctcgagaatgctgtttccgtcgccagcatcctgctgctgaccgaggca
accatgaccgatatcccggaaaaaccagcacctttgatgcaacccccaatccctgagtga

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