Pseudomonas plecoglossicida: RK21_02467
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Entry
RK21_02467 CDS
T03646
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RK21_02467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppj03019
]
RK21_02467
03110 Chaperones and folding catalysts [BR:
ppj03110
]
RK21_02467
03029 Mitochondrial biogenesis [BR:
ppj03029
]
RK21_02467
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppj04147
]
RK21_02467
Enzymes [BR:
ppj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RK21_02467
Messenger RNA biogenesis [BR:
ppj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RK21_02467
Chaperones and folding catalysts [BR:
ppj03110
]
Heat shock proteins
HSP60 / Chaperonin
RK21_02467
Mitochondrial biogenesis [BR:
ppj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RK21_02467
Exosome [BR:
ppj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RK21_02467
Exosomal proteins of other body fluids (saliva and urine)
RK21_02467
Exosomal proteins of breast cancer cells
RK21_02467
Exosomal proteins of colorectal cancer cells
RK21_02467
Exosomal proteins of bladder cancer cells
RK21_02467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJG13975
UniProt:
A0A0B5KC19
LinkDB
All DBs
Position
complement(2595940..2597559)
Genome browser
AA seq
539 aa
AA seq
DB search
MPHSKILFRSAAREKILSGATQLADAVRVTLGPKSKSVLMQSSWGKPTVCNDGVTIAKRV
FLQDPEENLGAQMLRQAAERTGEAVGDGTSTATVLAHAILADGVRNVVAGASAIDLKRGL
DKGLALVIKSLLAQSRQVCTAKEKAQVATLSAHNDPLIGQLVADALEKVGVEGVVSIEES
KTTETKVEIMDGMRFDRGYVSPYFVTDTEKMQVELTDACVLLCDHKIGALNDLLPLLEQV
AKSGQPLVVIAEDIDGEALTTLVVNQIRGVLRAVAVKAPGYGDRRKEILQDIAVLTGATL
VSAELGVTLDQLQLSQLGQVHRAVVLKDSTALIGGSGTQQAVATRVAHIRAQIEASTSDY
DREKLHERLARLAGGVAVIRVGAPSEAEMKARKDALDDALAATRAAIAEGIVPGAGLALL
KTVSVLLAEEANSEGDMRTGLQILRRALEAPARMIADNSAVDAGVVVARMLAETGSIGFD
AAANTYVDLYEAGIIDPTKVVRIALENAVSVASILLLTEATMTDIPEKPAPLMQPPIPE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgccccacagcaaaatcctgtttcgctccgcagcgcgggagaaaatcctcagtggtgcc
acccagctcgccgatgccgtgcgcgttacgctagggcccaaatcgaaatcggtactgatg
caaagcagttggggtaaaccgactgtctgcaacgatggcgtgaccatcgccaaacgcgtc
tttctgcaggatccggaggaaaacctcggcgcacagatgctgcgccaggcggccgagcgc
actggtgaagcggtgggtgatggcaccagtaccgcaactgtgctcgctcacgcgatcctg
gccgacggcgtgcgcaacgtggtggccggagccagtgccatcgatctcaagcgaggcctg
gacaagggcttggcgctggtcatcaaatcgttgctggcgcagtcacgacaggtctgcact
gccaaggaaaaagcacaagtggcgacgttgtcagcgcacaacgatccgttgattggccag
ttggtcgccgatgccctggaaaaggttggcgtggaaggtgtggtcagcatcgaggaatcc
aagaccaccgaaaccaaggtcgagatcatggatggcatgcgcttcgaccgaggctatgtg
tcgccttacttcgtcaccgacaccgagaagatgcaggtcgaactgaccgatgcctgtgtc
ttgctatgcgatcacaagatcggcgcactcaacgatctgctacccctgctggaacaggtg
gcgaaaagcggtcagccgctggtggttattgccgaggacatcgacggcgaggccctgacc
acgctggtagtcaaccagatccgcggcgtactgcgcgcggtggcggtgaaggctcctggg
tatggcgaccggcgcaaggaaatacttcaggacatcgcggtgctcacgggggcgaccctg
gtgtcggcagagcttggcgtcacgctcgatcagttgcagctgtcccagcttggccaagtg
caccgtgcggtggtgttgaaggacagcaccgcgttgattggaggcagtggcacgcagcaa
gcggtggctacccgcgttgcgcatatccgcgcccagatcgaggccagcaccagcgattat
gatcgggaaaaactgcacgaacgcctggccaggcttgccggcggagtggcagtgatacgt
gtcggggcaccctccgaggcggagatgaaagcgcgcaaggacgcattggacgatgccctg
gccgccacccgtgcagccatcgccgaaggcatcgtgcctggcgccggcctggctttgctg
aagactgtgtcggtgttgctcgctgaagaggcgaacagcgaaggcgatatgcgtacgggc
ctgcagatactgcgccgtgcgctggaggccccggcgcggatgattgccgataattccgcg
gtggatgcgggtgtggtggtggcacgcatgctcgccgaaacgggcagtatcgggttcgac
gcggcggccaacacctatgtcgacctgtacgaggccggcatcatcgaccccaccaaagtg
gtgcgcatcgccctcgagaatgctgtttccgtcgccagcatcctgctgctgaccgaggca
accatgaccgatatcccggaaaaaccagcacctttgatgcaacccccaatccctgagtga
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