Pseudomonas plecoglossicida: RK21_02577
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Entry
RK21_02577 CDS
T03646
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RK21_02577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_02577
Enzymes [BR:
ppj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RK21_02577
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RK21_02577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
AJG14085
UniProt:
A0A099MZM9
LinkDB
All DBs
Position
complement(2703420..2704214)
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AA seq
264 aa
AA seq
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MKALKIATFNINGIRSRLPALLAWLEREKPDIACLQELKAADQQFPRQALETAGYGCLYQ
GQPSWNGVAILARGSEPLEVRRGLPGMEDDNQSRYLEAAVQGVLVACLYLPNGNPQPGPK
FDYKLRWFESLIAHVKGLHDSGHPAVLAGDFNVVPTDMDIYNTRSWMKDALLQPESRACY
QKLLQQGWLDAIRHLYPDERIYTFWDYFRNHWARNAGLRIDHLLLNPELAPYLKRAGVDA
WVRNEPKASDHAPVWIELGTRRRP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgctgaagattgccacgttcaacatcaacggcattcgtagccggctgccggca
ctgctggcttggctggagcgggaaaagcccgacatcgcctgcctgcaggaactcaaggcg
gcggatcagcagtttcctcgccaggcgctagaaacggcgggttatggttgcctctaccaa
gggcagccttcgtggaatggcgtggccattctggcacggggcagcgaaccgctggaagta
cgtcgtggcctgcctggcatggaggacgacaaccagagccgctacctcgaggcagcggta
cagggagtgctggtggcttgcctgtatctgccgaacggcaacccgcaaccggggccgaaa
ttcgattacaagctccgctggttcgaaagcctgatcgcccatgtgaaagggctgcatgac
agtggccatcccgcggtgctggcgggtgatttcaatgtggtgcctaccgacatggatatc
tacaacacgcgctcctggatgaaggacgcgctgctgcagcccgaatcacgcgcgtgctac
cagaaactgctccagcaaggctggctcgacgccattcgccatctgtatccggacgagcgc
atttacaccttctgggattatttccgcaaccactgggcacgcaacgccgggttgcgtatc
gaccacctgctgctcaaccccgagctcgcgccttacctgaagcgggctggtgtcgatgcc
tgggtgcgtaacgaacccaaggccagcgaccatgcgcccgtctggatcgagctgggcacg
cgtcgccggccatag
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