Pseudomonas plecoglossicida: RK21_02635
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Entry
RK21_02635 CDS
T03646
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_02635
Enzymes [BR:
ppj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RK21_02635
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RK21_02635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AJG14143
UniProt:
A0A099N070
LinkDB
All DBs
Position
complement(2764723..2766249)
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AA seq
508 aa
AA seq
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MRLGLVLGDQLSFDLASLNALDPARDAVLMAEVEGEARYVPHHPLKIVLIFSAMRHFALA
LRERGWQVHYVQLDDDGNSGTIVGELRRWQQALGATHIHLTECGEWRLEQALRDAALPLV
WHRDTRFLCSREAFARWARERGQLRMEHFYRGMRKRTGLLLEPDGSPAGGTWNLDGDNRK
ALPRQLRGPFAAHFAQDDITAAVIALVRQRFSDHYGAIDGFDYPVTHAEAQQLWQHFLDF
GLAAFGDYQDAMAEGEPYLFHARISAALNIGLLDVRFLCDGVDKAWREGRVPLNAAEGFI
RQLIGWREYVRGIYWLRMPEYAALNYLGNERALPEFYWTGRTRMRCMEQAIGQTLRLGYA
HHIQRLMVTGNFALLAGIAPTAICEWYLAVYMDAFDWVELPNTLGMVMYADGGYLGSKPY
CASGRYIQRMSDHCKACSYRVDQVAEEGACPFNALYWHFLIRHRHLLSANPRLALVYRNL
DGMSADRRDAIWQRGQSLLARLDAAQPI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgggtctggtactgggtgaccagctgtccttcgacctggcaagcctcaacgcc
ctcgatcctgcccgcgatgctgtgctgatggcggaagtggaaggggaggccaggtacgtg
ccgcatcatccgctgaagatcgtcctgatcttcagcgccatgcggcacttcgcactggca
ctgcgcgagcgcggttggcaggtgcattatgtgcaactcgatgatgacggcaacagcgga
accatcgttggcgagttgcggcgctggcagcaggccctgggagccacgcatattcacctg
accgagtgcggagagtggcgcctggagcaggcgttgcgcgatgccgcactgccgcttgtg
tggcatcgcgacacgcgatttctatgctctcgcgaagctttcgcgcgctgggcccgggag
cgcggccaactgcgcatggaacacttctaccgtggcatgcgcaaacgcaccggcctgctg
ctggagcctgacggcagcccggcaggtggaacctggaatctcgatggcgacaaccgcaag
gccttgcctcgccagctacgtggccccttcgccgcacatttcgcacaggacgacatcaca
gctgcagtcatagccctggtacggcaacgcttcagcgaccactacggagccatcgacggt
ttcgactacccggtgacccatgccgaggcacagcagctctggcaacactttctggatttc
ggcctggcggctttcggtgactaccaggatgcgatggccgagggcgagccgtacctgttc
catgcgcgcatcagtgcagcactcaacatcgggcttcttgatgtgcgttttctatgcgac
ggggtcgacaaggcctggcgcgaggggcgagtgccgctcaatgccgcagagggcttcatc
cgccagctgatcggctggcgtgagtatgtacgcggcatctattggctgcgcatgccggag
tatgccgcgctcaattacctgggtaacgagcgagcgttgccggaattctactggaccggt
cgcacccgcatgcgctgcatggagcaggccatcgggcaaacccttcgcttgggttacgct
caccatatccagcgcctgatggtcaccggcaacttcgccttgttggccggtatcgcgccc
accgcaatctgtgagtggtacctggctgtctacatggatgccttcgactgggtcgaactg
cccaacacgcttggtatggtgatgtacgccgacggcggctacctgggctccaagccttac
tgcgccagcggtcgctacatccagcgcatgtccgatcattgcaaggcctgcagttacagg
gttgaccaggtggccgaggaaggtgcctgcccgttcaatgccctgtactggcattttctc
atccgtcatcgccacctgctttcggccaacccgcgtctggcgctggtctatcgaaacctc
gatggcatgtcggctgaccgtcgcgatgccatctggcagcgtggccagtcacttttggcg
cgactcgatgcggcgcaaccgatatga
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