KEGG   Pseudomonas plecoglossicida: RK21_02743
Entry
RK21_02743        CDS       T03646                                 
Name
(GenBank) channel protein TolC
  KO
K12538  outer membrane protein, type I secretion system
Organism
ppj  Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppj02000]
    RK21_02743
   02044 Secretion system [BR:ppj02044]
    RK21_02743
Transporters [BR:ppj02000]
 Other transporters
  Pores ion channels [TC:1]
   RK21_02743
Secretion system [BR:ppj02044]
 Type I secretion system
  Multiple protein transporter
   RK21_02743
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: AJG14251
LinkDB
Position
2889125..2890453
AA seq 442 aa
MNRPCLMLCLLGLSVQASAMDLKQAWDLLQYQGPIYRAAVHEKEAGSENRAIGQAGLLPQ
INAVGYFNKVNGSQRQSGRDNDLDYDSKGANVRLRQPLFNKQKMAEYHQGQQRADYSVAV
FDAKTQDAAVRLADAYFDVLLASETITLAKAKLNAFEEQLASAKRRMELGAGTITDIDES
IARRDLAEADLIEAQDNLVNARRKLEEYIGETPESLTTLQPGFNTPPLMPGNLQDWLVKA
QADSPLIHARRHNYELAEEEVKRARAGHWPTLDFVAGYTAGSSQSISELNQRNHYSSIGL
ELNIPLYSGGSTSALTRQASANSSKALDELDATRQEVISDTTREYRGVQSGALRIQALEK
AVASNERSLLSARKGFREGGTSTNSDVLNAEELLFDARHDLFEAKLNYLMSRLRLASSVG
SLGDDDIQQINDYLGPELVVSN
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaatcgcccgtgcctgatgttgtgcctgttggggttgtccgtacaggccagtgccatg
gacctgaagcaagcctgggacctgctgcaataccagggcccgatctaccgcgccgcggtg
cacgagaaagaagccggcagcgagaaccgcgccatcggccaggccggcctgctgccgcag
atcaacgctgtgggttacttcaacaaggtcaatggcagccaacgtcagagcggccgggac
aacgacctggactatgactccaagggtgccaacgtgcggttgcgccaaccgctgttcaac
aagcagaagatggccgaataccatcagggccagcaacgtgccgactacagcgtggcggtg
ttcgatgccaagacccaggacgctgcggtgcgcctggccgacgcctacttcgacgtgctg
ctggccagcgaaaccatcaccctggccaaggccaagctaaatgccttcgaagagcagctg
gcgtcggcaaagcggcgcatggagctgggcgccggcaccatcaccgacatcgacgagtcg
atagcccgtcgcgacctggccgaggccgacctgatcgaggcccaggacaacctggtcaac
gcccgccgcaagctggaggaatacattggtgaaacgccggagtcgctgaccaccttgcag
ccgggcttcaacacaccgccgctgatgccgggcaacctgcaggactggctggtcaaggcc
caggccgacagcccgttgatccatgcgcgccggcacaactacgagctggccgaagaagaa
gtgaaacgcgcccgcgccgggcactggccgaccctggatttcgtggcgggctataccgcc
ggcagcagccagtcgatctccgaactgaaccagcgcaaccactacagctcgatcgggctg
gagctgaacattccgctatacagcggcggcagcaccagcgccctcacccgccaggccagc
gccaacagttccaaggcactggatgaactggatgccacgcgccaggaagtgatctccgac
accacccgcgagtatcgcggtgtacagagtggcgccttgcgcatccaggcgctggaaaag
gccgtggcatccaacgaacgctcgctgctttcggcccgcaagggcttcagggagggcggc
accagcaccaactcggatgtgctcaatgccgaggaattgctttttgacgcccggcatgac
ctgttcgaggcgaagctgaactacctgatgtcgcggctgcgcctggcatcgtcggtgggc
agcctgggagatgacgatatccagcagatcaacgattacctcgggccggaactggtagta
agcaactga

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