Pseudomonas plecoglossicida: RK21_02984
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Entry
RK21_02984 CDS
T03646
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K19585
multidrug efflux pump
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_02984
Transporters [BR:
ppj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RK21_02984
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AJG14492
UniProt:
A0A0B5KK00
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All DBs
Position
3127023..3130190
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AA seq
1055 aa
AA seq
DB search
MNFARFFVDRPIFAAVLSIIIFVVGLIAIPLLPVSEYPEVVPPSVQVRATYPGANPREIA
DTVAAPLEASITGVENMLYMKSVAGSDGVLVLTVTFRPGTDPDDAQVKVQNRVAQAEPRL
PEAVRQQGVVTVKQFPNETLVVQLRSPGDRYDALYLRNYAVLHVRDELARIQGVGDATII
GSGDYAMRLWLDPDKIAALGMTAGDVVEAVREQNVQVSAGQLGAPPNPSGSDFLLSINAQ
GRLVTEEEFGDVIVKTGSQGQVTRLRDVARVEMDASSYSLMSLLNNKPAVAISVFEAPGA
NAIEISDQVRAKMDELAKRFPEGVEWSLEYDSTVFVRQSIKAVVNTLLEAIGLVVLVVIL
FLQTWRASIIPLLAVPVSVVGTFAVLLMLGFSINTLTLFGLVLAIGIVVDDAIVVVENVE
RNIAEGLAPLAAAHQAMREVSGPIVAISLVLCSVFVPMAFLSGVTGQFYKQFAVTIAIST
VISAINSLTLSPALAARLLRPHGAAPDLPTRVLDRSLGWILRPFNRFFLRSADGYGNSVS
RILGRRGAVFLVYIALLVATGAVFKAVPGGFIPMQDKLYLLGVIQLPEGASLERTEALVR
RVSDIALKTDGVYNAVQFPGMNGLQLTNTSNSGLVYFVLKPINERKHTATEIAEQLNERF
AQEQDGLAFAIMPPPVMGLGAGSGFSLYVQDRNREGYAALQTATTELATAISQEPGFQYP
ISSYQANVPQLDAVVDRTKAKAQGVAVTDLFDTLQVYLGSAYVNDFTRFGRTFRVMAQAD
APFRSSVEDVVKLRTRNANGDMVPIGSMVDVRKTFGPDPVIRFNGYPSADLIGEFDPRLV
SSSQALQQVQSIADKVLPPGMQLEWTDLSYQQVTQSNTALVVFPLAVLLVFLVLAALYES
WTLPLAVILIVPMSLLSAMTGVWLAGGDSNIFVQIGLIVLIGLASKNAILIVEFARELER
KGHSILDAALEASRLRLRPIIMTSIAFIAGVVPLMVGSGAGAEIRQVMGVTVFAGMLGVT
LFGLFLTPVFYVALRRLATRKPRRQANVAMEATHD
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcccgctttttcgtggacaggccgatttttgcggccgtgctgtccatcatc
attttcgtggttgggttgatcgcgatcccgctcttgcccgtcagcgagtacccggaagtc
gtgccacccagcgtacaggttcgcgccacgtatcctggcgcaaatccgcgcgaaatcgcc
gacacggtagccgcaccactggaggcatccatcaccggcgtggaaaacatgctctacatg
aagtccgtggccggtagtgatggcgtgttggtgctgaccgtcaccttccgtcctggcacc
gatcccgacgacgcccaggtcaaggtacagaaccgtgtcgcccaggcagagccgcgtctt
cccgaagcggtgcgccagcaaggtgtggtgaccgtcaaacagttccccaacgaaacgctg
gtcgtgcagttgcgctcgccgggcgatcgctatgacgcgctgtacctgcgcaactatgcc
gtgctccatgtacgcgacgagttggcacgcatccagggggtgggcgatgccacgatcatc
ggctctggcgactacgccatgcgcttatggctggaccccgacaaaattgcggcgctgggt
atgaccgccggcgatgtggtcgaagccgtgcgcgaacagaacgtccaggtctcggccggt
caactaggtgcgccgcccaacccctcgggaagcgacttcctcctgtccatcaatgcgcag
ggccggctggtgacggaagaagagttcggcgacgtcatcgtcaagaccggatcgcagggt
caggtcacccggctgcgagatgtggcgcgcgtggaaatggacgcatccagctactcgctg
atgtcgttgctcaacaacaagcctgctgtcgcgatctctgtctttgaagccccgggcgcc
aatgccatcgaaatctcggatcaagtccgcgcgaagatggacgagttggccaagcgcttt
cccgagggagtggaatggtcgttggagtatgactcaactgtcttcgtgcgtcagtcgatc
aaggcggtcgtcaacactctgctggaagccatcggactggtggtgctggtggtgatcttg
ttccttcagacttggcgtgcctccatcatcccactgctagccgtgccggtgtcggtggta
ggcaccttcgccgtgctgctgatgctgggcttttccatcaatacgctcacgctttttgga
ctcgtgcttgccatcgggatcgtggtggacgacgcgatcgtggtggtggaaaacgtcgag
cgcaacatcgccgaagggctggcgccgctggctgcggcccatcaggccatgcgcgaagtc
agtggccccatcgtcgccatctcgctggtgctgtgctcggtattcgtgcctatggcattc
ctgtccggcgtgacagggcagttctacaaacagttcgccgtcaccattgcgatctccacg
gtaatttcggccatcaactcgctgacgctgtcgcctgcgctggccgcgcgcctgcttcgc
ccgcatggtgccgcgccagacctgcccacgcgggtgctggatcgcagtctgggctggata
ttacggccgttcaaccgtttcttcctgcgcagcgcggatggctatggaaacagcgtgtcg
cgcatcctcgggcggcgtggtgcggtgtttctcgtctacatcgcgctactggtggcgacg
ggagctgtgttcaaggccgtccctggcggattcatccccatgcaggacaagctgtatctc
ctcggtgtcatccagctacccgagggtgcatccctggagcgcacggaagcgctggtccgc
cgtgtgagcgacatcgcgctcaagaccgatggcgtctacaacgccgtgcagttcccgggc
atgaacggcttgcagttgaccaacacgtccaatagcggcctagtgtatttcgtactcaag
cccatcaatgagcgcaagcacactgcaaccgagattgcggaacagttgaacgagcgcttc
gctcaggagcaggacggtctggcctttgccatcatgccgccccctgtcatggggctgggc
gcgggttccgggttctctctttacgtgcaggatcgcaaccgtgagggctatgccgcattg
cagacggcgaccaccgagctggcgacggccatctcgcaagaaccgggattccaatatccg
atcagttcctatcaggccaatgtgccgcagcttgacgccgtagtggaccgcaccaaggcg
aaggcacagggcgtggccgtgaccgatcttttcgatacgctgcaagtgtacctgggttcg
gcgtatgtcaacgacttcacgcgctttggccgcaccttccgggtgatggctcaggcggac
gcaccgttccgcagttctgtcgaggacgtggtcaaactgcgcacccgcaacgccaatggc
gacatggtgcccatcggcagcatggtggacgtgcgcaagacattcggccccgatcccgtc
atccgcttcaacggctatccatctgccgacctgattggtgagtttgatccgcgtctggtg
tcgtcatcgcaggcattgcagcaagtgcaatccattgcagacaaggtgctgccgccaggc
atgcaactggagtggaccgacctcagctaccagcaggtcacgcaaagcaataccgcgctg
gtggtgttcccgctggcggtactgttggtcttcctggtgctggcggcactgtacgaaagc
tggacgttgccgctggccgtcatcctgatcgtgcccatgagcctgttgtcggccatgacg
ggcgtgtggctcgcgggtggtgacagcaacattttcgtgcagattggcttgatagtgctg
attggtctggcctccaagaatgccattctgatcgtggagttcgcccgtgaacttgagcgc
aaggggcacagcatcctcgatgccgcgctggaggcatcacgccttcgtctgcgcccgatc
atcatgacttccatcgccttcatcgctggcgtggtgccgctgatggtcggttccggcgca
ggcgcggagattcgccaggttatgggagtgactgtgttcgccggcatgctcggcgtgacc
ttgttcggtttattcctgactcctgttttctacgtcgcgttacgcaggctcgcgacgcgc
aagccacgtcgccaggcaaatgtcgccatggaggccacccatgactga
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