KEGG   Pseudomonas plecoglossicida: RK21_02992
Entry
RK21_02992        CDS       T03646                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
ppj  Pseudomonas plecoglossicida
Pathway
ppj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RK21_02992
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppj02044]
    RK21_02992
Enzymes [BR:ppj01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RK21_02992
Secretion system [BR:ppj02044]
 Type IV secretion system
  Trb secretion system protein
   RK21_02992
SSDB
Motif
Pfam: T2SSE nSTAND3 TrwB_AAD_bind AAA_16 FtsK_SpoIIIE DEAD AAA_30 Zeta_toxin AAA_28 ABC_tran ResIII AAA_25 AAA_7 CbiA ATPase MMR_HSR1 IstB_IS21 Mg_chelatase AAA_19 AAA_29 GTP_EFTU MobB Sigma54_activat Parvo_NS1 AAA_11 TsaE
Other DBs
NCBI-ProteinID: AJG14500
LinkDB
Position
3135799..3136797
AA seq 332 aa
MLRTAMGPVIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPLGVELPEADGERIIRLVAA
HVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRAVSIIGLDRYVADGILTT
GQAEFLRHAVRERHNILIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDH
VPLRTRAGVVSMTELVRATMRLRPDRVIVGEVRGGEALDLVKVWGTGHPGGIATIHAGSA
LGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGRKRHVETISRVVGFDGAGYRLAD
ALEATLPELPPVPLTAAAATPSSIPEQPGELP
NT seq 999 nt   +upstreamnt  +downstreamnt
atgctgcgcacggcgatggggccggtgatcgccgctgcgctggaagacccggacgtggtg
gaagtgatgctcaaccccgaccggacattgtgggtggatcggctgtcgtctggccgtgcg
ccgctcggcgtcgaactgcccgaagccgatggcgaacgcatcatccgcctggtcgccgcc
catgtcggtgcggaggtgcatcgcggccaaccgctcttgaccgccgaactgcctgaaacc
ggcgaacgcttcgagggcatcctgccgcccgccgcacccggcccggcctttgcgctgcgc
aagcgtgccgtgagcatcatcggtctggatcgctatgtggctgatggcatcctgaccact
gggcaggccgagtttctgcgtcatgccgtgcgcgagcggcacaacatcctgatcgccgga
ggcaccagcaccggcaagaccacgctggccaatgccttgctggccgagatcgccgccacc
ggcgaccgcgtgctggtgctcgaagacaccatcgaactgcaatgcgcggcccgcgaccat
gtgccgctgcgcacccgcgccggcgtcgtgtccatgaccgagctggtgcgggccacgatg
cgcctgcggcccgaccgcgtgatcgtcggcgaagtgcgcggcggcgaagcgctggatctg
gtgaaggtctggggcaccggccaccccggcggcatcgccaccattcatgccggctccgcg
ttgggcgcgctgctgcgcctggagcaactgatcctcgaagtggcggtgaatccgccccgc
gccctgatcgccgaggcggtcaatgtcgtgatccacatcgcaggccgcggccgcaagcgc
cacgtcgaaaccatttcccgcgtcgtcggtttcgacggcgcgggctaccgcctggcggat
gcgctggaagcgacgcttcccgagctgccgccggttcctcttacagccgctgccgctacg
ccttcctcgatccctgaacaacctggagaactgccatga

DBGET integrated database retrieval system