Pseudomonas plecoglossicida: RK21_03008
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Entry
RK21_03008 CDS
T03646
Name
(GenBank) alanine racemase
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppj03000
]
RK21_03008
Transcription factors [BR:
ppj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RK21_03008
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
MoeA_C
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AJG14516
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Position
complement(3149319..3150341)
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AA seq
340 aa
AA seq
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MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIAELDYVPSAVARSLKARSTA
TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV
VASVGQDSDLLQSLAGVRTPMVIVDRELDGVDADLVRIDHEQGAFLATQHLLELGHHDIA
YIGGPAETGVTQLRLSGFRRAMAEAGVPVRNDRVLHCDFTSPGGHAAAGRLLEGKRPTAI
FAGNDMIGFGVLRAAAERNINVPGELSVIGFDDIELSRYVYPPLTTVGQSIRELGESAAS
LLLTRIGTPRQGAAEQRIVAPRIVLRESTGPRPDLFNDYR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatcaaagacgtcgcggcactggcgggcatttcctacaccaccgtgtcccat
gtgctgaacaagacccgaccggtcagcgagcaggtgcggttgaaagtcgaagccgccatc
gccgaactcgactacgtacccagcgccgtggcccgctcgctgaaggcgcgcagcacggcc
accatcggcctgctggtacctaacagcgtcaacccgtacttcgccgagctggcgcggggc
atcgaagacgcctgcgaacgcaacggctactgcgtgatcctgtgcaactccgacgacaac
ccgcaaaagcagcgcagctacctgcgcgtgctgctggaaaagcgcatcgacggcctggta
gtggcttcggtagggcaggacagcgacctgctgcaaagcctggctggtgtgcgcacgccc
atggtgatcgtcgaccgcgaactggacggtgtcgatgccgacctggtgcgcatcgaccac
gagcagggcgccttcctggccacccagcacctgctggaacttggtcaccatgacatcgcc
tacatcggcggccccgccgagaccggtgtgacccagctgcgcctgagcggcttccgccgc
gccatggccgaagccggtgtgccggtgcgcaacgaccgcgtgctgcactgcgacttcacc
agccccggcggccatgcagccgcaggccggctgctggagggcaagcggcctacggcgatt
tttgccggcaacgacatgatcggcttcggtgtgctgcgtgccgcggccgaacgcaatatc
aacgtgcccggcgagctgtcggtgatcggcttcgacgacatcgagctcagccgttacgtg
tacccaccgttgaccacggtgggccagtcgattcgcgagctgggcgagagcgccgcgtcg
ctgttgctgacgcgcatcggcaccccccggcagggcgcggcagagcaacgcatcgtcgcc
ccgcgcattgtgctgcgcgagtccaccgggccgcgcccggacctgttcaacgattaccgc
tga
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